RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 LINC00346Q8IVM7 164 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 LNX2Q8N448 690 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 SLC38A2Q96QD8 506 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 ZNF416Q9BWM5 594 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 OR10A4Q9H209 315 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 OR51V1Q9H2C8 321 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 CCNB1IP1Q9NPC3 277 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 NGBQ9NPG2 151 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 TMEFF2Q9UIK5 374 aaPredicted RBP11.5□□□□□ -0.57
TUBD1-202ENST00000340993 B9D1Q9UPM9 204 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 PLEKHA6Q9Y2H5 1048 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 RNF115Q9Y4L5 304 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 USF3Q68DE3 2245 aa11.5□□□□□ -0.57
TUBD1-202ENST00000340993 AKAP9Q99996 3911 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 NR2C1P13056 603 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 ZNF32P17041 273 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 CRISP1P54107 249 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 ELF3P78545 371 aaPredicted RBP11.49□□□□□ -0.57
TUBD1-202ENST00000340993 KDM4DQ6B0I6 523 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 PLBD1Q6P4A8 553 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 TMEM154Q6P9G4 183 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 TMEM108Q6UXF1 575 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 BCDIN3DQ7Z5W3 292 aaKnown RBP11.49□□□□□ -0.57
TUBD1-202ENST00000340993 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 BBS1Q8NFJ9 593 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 NANOS1Q8WY41 292 aaKnown RBP11.49□□□□□ -0.57
TUBD1-202ENST00000340993 C11orf40Q8WZ69 217 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 AKAP1Q92667 903 aaKnown RBP eCLIP11.49□□□□□ -0.57
TUBD1-202ENST00000340993 EME1Q96AY2 570 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 FBXO17Q96EF6 278 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 C14orf79Q96F83 325 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 PLEKHA8Q96JA3 519 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 SLC29A1Q99808 456 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 GABARAPL1Q9H0R8 117 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 POLE4Q9NR33 117 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 ATP23Q9Y6H3 246 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 PDZD2O15018 2839 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 ARPC4-TTLL3A0A0A6YYG9 625 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 CENPBD1B2RD01 187 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 IFNGP01579 166 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 APEHP13798 732 aaKnown RBP11.49□□□□□ -0.57
TUBD1-202ENST00000340993 ANPEPP15144 967 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 ZNF3P17036 446 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 MSR1P21757 451 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 CALCRP30988 508 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 PCYT1AP49585 367 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 CDH11P55287 796 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 HSF2Q03933 536 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 DAG1Q14118 895 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 PTGES3Q15185 160 aaKnown RBP11.49□□□□□ -0.57
TUBD1-202ENST00000340993 TRIP10Q15642 601 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 SNAPC1Q16533 368 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 KLHL12Q53G59 568 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 KRT80Q6KB66 452 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 ZNF774Q6NX45 483 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 GLB1L2Q8IW92 636 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 C10orf67Q8IYJ2 551 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 RBM4BQ9BQ04 359 aaKnown RBP11.49□□□□□ -0.57
TUBD1-202ENST00000340993 KCNS3Q9BQ31 491 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 RBM4Q9BWF3 364 aaKnown RBP11.49□□□□□ -0.57
TUBD1-202ENST00000340993 KCNN2Q9H2S1 579 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 SIAEQ9HAT2 523 aa11.49□□□□□ -0.57
TUBD1-202ENST00000340993 IGLV1-36A0A0B4J1U3 117 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 H0YHG0 523 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 IDH3BO43837 385 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 UBL3O95164 117 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 APEX1P27695 318 aaKnown RBP11.48□□□□□ -0.57
TUBD1-202ENST00000340993 CRABP1P29762 137 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 NR1H2P55055 460 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 RPS7P62081 194 aaKnown RBP11.48□□□□□ -0.57
TUBD1-202ENST00000340993 MRPS34P82930 218 aaKnown RBP11.48□□□□□ -0.57
TUBD1-202ENST00000340993 PPP2R2BQ00005 443 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 ENDOGQ14249 297 aaKnown RBP11.48□□□□□ -0.57
TUBD1-202ENST00000340993 SLC36A2Q495M3 483 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 PABPC1L2AQ5JQF8 200 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 ZNF362Q5T0B9 420 aaPredicted RBP11.48□□□□□ -0.57
TUBD1-202ENST00000340993 DNM1P34Q6PK57 102 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 ZBTB49Q6ZSB9 765 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 ZNF511Q8NB15 262 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 SMAP2Q8WU79 429 aaPredicted RBP11.48□□□□□ -0.57
TUBD1-202ENST00000340993 LURAP1Q96LR2 239 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 IL4I1Q96RQ9 567 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 OSBPL10Q9BXB5 764 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 B3GNT2Q9NY97 397 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 ASH2LQ9UBL3 628 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 NKX1-2Q9UD57 310 aaPredicted RBP11.48□□□□□ -0.57
TUBD1-202ENST00000340993 KLHL21Q9UJP4 597 aa11.48□□□□□ -0.57
TUBD1-202ENST00000340993 ARID1AO14497 2285 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 SHISA9B4DS77 424 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 SURF4O15260 269 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 MGRN1O60291 552 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 CBR1P16152 277 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 SPI1P17947 270 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 NPR2P20594 1047 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 PEX2P28328 305 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 GRK5P34947 590 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 ZNF133P52736 654 aaPredicted RBP11.47□□□□□ -0.57
TUBD1-202ENST00000340993 TMEM53Q6P2H8 277 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 SPATC1Q76KD6 591 aa11.47□□□□□ -0.57
TUBD1-202ENST00000340993 ZNF584Q8IVC4 421 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms