RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 GLRA3O75311 464 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 VAMP5O95183 116 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 PDYNP01213 254 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 SNRNP70P08621 437 aaKnown RBP8.79□□□□□ -1
ATXN3-201ENST00000340660 DDCP20711 480 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 TNFSF4P23510 183 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 NTSP30990 170 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 ATP6V0D1P61421 351 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 HSPB3Q12988 150 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 GTF2H2Q13888 395 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 TBC1D28Q2M2D7 210 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 PLA1AQ53H76 456 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 TTC19Q6DKK2 380 aaPredicted RBP8.79□□□□□ -1
ATXN3-201ENST00000340660 GTF2H2CQ6P1K8 395 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 SZRD1Q7Z422 152 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 TMEM219Q86XT9 240 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 PMM1Q92871 262 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 MS4A4EQ96PG1 132 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 OR2M2Q96R28 347 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 ZNF382Q96SR6 550 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 CAB39LQ9H9S4 337 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 RETNQ9HD89 108 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 SELENONQ9NZV5 590 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 KIAA1456Q9P272 454 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 KCNE5Q9UJ90 142 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 OSGIN1Q9UJX0 560 aa8.79□□□□□ -1
ATXN3-201ENST00000340660 GNG14A0A1W2PPG7 69 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 AKAP8O43823 692 aaKnown RBP8.78□□□□□ -1
ATXN3-201ENST00000340660 ALDOBP05062 364 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 IGHV4-30-4P0DP06 118 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 WNT5AP41221 380 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 ACAA2P42765 397 aaKnown RBP8.78□□□□□ -1
ATXN3-201ENST00000340660 RPL23AP62750 156 aaKnown RBP8.78□□□□□ -1
ATXN3-201ENST00000340660 HOXA4Q00056 320 aaPredicted RBP8.78□□□□□ -1
ATXN3-201ENST00000340660 DCST2Q5T1A1 773 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 RNASEH2BQ5TBB1 312 aaKnown RBP8.78□□□□□ -1
ATXN3-201ENST00000340660 RNLSQ5VYX0 342 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 EMBQ6PCB8 327 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 BTN2A1Q7KYR7 527 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 Q8N7P7 452 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 PIK3C3Q8NEB9 887 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 IQCDQ96DY2 449 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 NUDT11Q96G61 164 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 FOXB1Q99853 325 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 PTDSS2Q9BVG9 487 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 HIPK2Q9H2X6 1198 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 ERVK-18Q9QC07 812 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 ONECUT1Q9UBC0 465 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 KCNE3Q9Y6H6 103 aa8.78□□□□□ -1
ATXN3-201ENST00000340660 CCDC189A1A4V9 331 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 IFNL4K9M1U5 179 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 HDAC3O15379 428 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 BANF1O75531 89 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 CSTAP01040 98 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 TSPAN8P19075 237 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 ACSM1Q08AH1 577 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 LRRC57Q8N9N7 239 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 FAM71CQ8NEG0 241 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 OR52H1Q8NGJ2 320 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 PITX2Q99697 317 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 FAM110AQ9BQ89 295 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 WACQ9BTA9 647 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 MMADHCQ9H3L0 296 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-201ENST00000340660 NOL11Q9H8H0 719 aaKnown RBP8.77□□□□□ -1.01
ATXN3-201ENST00000340660 DUSP22Q9NRW4 184 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 TAS2R7Q9NYW3 318 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 TMCC3Q9ULS5 477 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 RASD1Q9Y272 281 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 POFUT2Q9Y2G5 429 aa8.77□□□□□ -1.01
ATXN3-201ENST00000340660 DNAH5Q8TE73 4624 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 PRSS29PA6NIE9 313 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 PPP6CO00743 305 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 PRODHO43272 600 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 TIMM8AO60220 97 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-201ENST00000340660 SCN2BO60939 215 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 FASP25445 335 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 ARL1P40616 181 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-201ENST00000340660 KCNJ1P48048 391 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 RGS6P49758 472 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 UBE2E1P51965 193 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 HAGHQ16775 308 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 ZNF260Q3ZCT1 412 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 SPANXN3Q5MJ09 141 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 CARD17Q5XLA6 110 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 TMEM65Q6PI78 240 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 RFPL4BQ6ZWI9 263 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 GSTA5Q7RTV2 222 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 OR2W3Q7Z3T1 314 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 ISCA2Q86U28 154 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 C20orf196Q8IYI0 205 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 RAX2Q96IS3 184 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 MAGEB18Q96M61 343 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 C18orf15Q96N68 181 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 STACQ99469 402 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 BRF2Q9HAW0 419 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 TBK1Q9UHD2 729 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 TCF19Q9Y242 345 aa8.76□□□□□ -1.01
ATXN3-201ENST00000340660 IGHV3-64DA0A0J9YX35 117 aa8.75□□□□□ -1.01
ATXN3-201ENST00000340660 A6NDX4 124 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms