RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 VRK3Q8IV63 474 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 SKA3Q8IX90 412 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 OR1S2Q8NGQ3 325 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 KCNG3Q8TAE7 436 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 HRASLS5Q96KN8 279 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
XIRP1-201ENST00000340369 GRPP07492 148 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 IMPA1P29218 277 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 ARHGAP11BQ3KRB8 267 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 OR6V1Q8N148 313 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 FBXL14Q8N1E6 418 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 OR2T11Q8NH01 316 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 DHRS4Q9BTZ2 278 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 ABHD6Q9BV23 337 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 ARV1Q9H2C2 271 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 MED17Q9NVC6 651 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 SMLR1H3BR10 107 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 UBE2G2P60604 165 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 PHLDA2Q53GA4 152 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 LPCAT3Q6P1A2 487 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 CMTM2Q8TAZ6 248 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 HPSE2Q8WWQ2 592 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 C11orf40Q8WZ69 217 aa11.57□□□□□ -0.56
XIRP1-201ENST00000340369 PRRC2BQ5JSZ5 2229 aaKnown RBP11.57□□□□□ -0.56
XIRP1-201ENST00000340369 SLC35G3Q8N808 338 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 UTP4Q969X6 686 aaKnown RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 GON7Q9BXV9 100 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 MTCH1Q9NZJ7 389 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 LRIT2A6NDA9 550 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 EFSO43281 561 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 ETV6P41212 452 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 GABRA4P48169 554 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 Q499Y3 187 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 GCNT2Q8N0V5 402 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 BATF2Q8N1L9 274 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 SLC22A24Q8N4F4 322 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 SCN7AQ01118 1682 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 NDUFB7P17568 137 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 PSMB1P20618 241 aaKnown RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 BMP5P22003 454 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 DEFA6Q01524 100 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 TRA2AQ13595 282 aaKnown RBP eCLIP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 NUMA1Q14980 2115 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 HENMT1Q5T8I9 393 aaKnown RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 CD300LGQ6UXG3 332 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 BCDIN3DQ7Z5W3 292 aaKnown RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 NLRP8Q86W28 1048 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 C15orf54Q8N8G6 183 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 OR52A5Q9H2C5 316 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 ZMAT3Q9HA38 289 aaKnown RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 IL21Q9HBE4 155 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 MYO7AQ13402 2215 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 ZNF732B4DXR9 585 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 TRHRP34981 398 aaPredicted RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 ADRA1AP35348 466 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 TMEM211Q6ICI0 200 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 RHOXF1Q8NHV9 184 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 ZNF707Q96C28 371 aaPredicted RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 FBXO17Q96EF6 278 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 PIGLQ9Y2B2 252 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 EIF1BO60739 113 aaKnown RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 OR2J2O76002 312 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 SCG5P05408 212 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 GLYR1Q49A26 553 aaPredicted RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 PDLIM5Q96HC4 596 aaKnown RBP11.56□□□□□ -0.56
XIRP1-201ENST00000340369 CRLF2Q9HC73 371 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 NPFFR2Q9Y5X5 522 aa11.56□□□□□ -0.56
XIRP1-201ENST00000340369 IGFBP1P08833 259 aaPredicted RBP11.55□□□□□ -0.56
XIRP1-201ENST00000340369 ZNF93P35789 620 aaPredicted RBP11.55□□□□□ -0.56
XIRP1-201ENST00000340369 REEP5Q00765 189 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 FOXK2Q01167 660 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 ALKBH1Q13686 389 aaKnown RBP11.55□□□□□ -0.56
XIRP1-201ENST00000340369 HMGN3Q15651 99 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 ELAVL1Q15717 326 aaKnown RBP11.55□□□□□ -0.56
XIRP1-201ENST00000340369 ADIRFQ15847 76 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 COX20Q5RI15 118 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 ANKRD34AQ69YU3 496 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 ZNF454Q8N9F8 522 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 CENPOQ9BU64 300 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 OR11A1Q9GZK7 315 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 TNFRSF19Q9NS68 423 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 SERTM1A2A2V5 107 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 POU2F2P09086 479 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 NAGAP17050 411 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 COL9A1P20849 921 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 IL3RAP26951 378 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 STEAP1BQ6NZ63 245 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 PGAP1Q75T13 922 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 TSLPQ969D9 159 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 PLK3Q9H4B4 646 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 NECAP2Q9NVZ3 263 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 PRELID3BQ9Y3B1 194 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 SLC22A20A6NK97 555 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 CRYAAP02489 173 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 NME1P15531 152 aaKnown RBP11.55□□□□□ -0.56
XIRP1-201ENST00000340369 CCR6P51684 374 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 SRPXP78539 464 aa11.55□□□□□ -0.56
XIRP1-201ENST00000340369 NXNL2Q5VZ03 156 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms