RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 GIFP27352 417 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 HTR3AP46098 478 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 NTRK2Q16620 822 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 TATDN3Q17R31 274 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 WIPI1Q5MNZ9 446 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 ZNF385CQ66K41 422 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 MRPL14Q6P1L8 145 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 LRRC28Q86X40 367 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 MINDY2Q8NBR6 621 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 OR5D18Q8NGL1 313 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 ROBO4Q8WZ75 1007 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 ST8SIA1Q92185 356 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 HGDQ93099 445 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 SLC25A44Q96H78 314 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 MED18Q9BUE0 208 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 EVA1AQ9H8M9 152 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 RANGRFQ9HD47 186 aaPredicted RBP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 P4HTMQ9NXG6 502 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 TAS2R4Q9NYW5 299 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 IGHV1-45A0A0A0MS14 117 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 YKT6O15498 198 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 PATE4P0C8F1 98 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 FGF5P12034 268 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 SPINK2P20155 84 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 DAP3P51398 398 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 SELENBP1Q13228 472 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 SLC23A3Q6PIS1 610 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 STAC2Q6ZMT1 411 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 FGD2Q7Z6J4 655 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 CDC20BQ86Y33 519 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 PLCZ1Q86YW0 608 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 PRSS35Q8N3Z0 413 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 ZNF283Q8N7M2 679 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 WDSUB1Q8N9V3 476 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 CHST4Q8NCG5 386 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 OR51A2Q8NGJ7 313 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 C11orf40Q8WZ69 217 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 STMN3Q9NZ72 180 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 TCFL5Q9UL49 500 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 RCE1Q9Y256 329 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 ICE1Q9Y2F5 2266 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 ROS1P08922 2347 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 APC2O95996 2303 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 IGLV3-12A0A075B6K2 115 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 RER1O15258 196 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 QDPRP09417 244 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 CRABP1P29762 137 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 RPS11P62280 158 aaKnown RBP eCLIP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 BDH1Q02338 343 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 DNM1P34Q6PK57 102 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 OR2M3Q8NG83 312 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 SLC35B4Q969S0 331 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 RNF121Q9H920 327 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 KLHL9Q9P2J3 617 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 LIPT2A6NK58 231 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 INMT-MINDY4F8WBC2 141 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 KRT33AO76009 404 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 CD2P06729 351 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 IFI6P09912 130 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 KIR3DL2P43630 455 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 SLC17A1Q14916 467 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 TRAM1Q15629 374 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 ZFP69Q49AA0 526 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 CFAP47Q6ZTR5 3102 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 MISPQ8IVT2 679 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 SIAH3Q8IW03 269 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 BATF2Q8N1L9 274 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 BEST3Q8N1M1 668 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 POC1BQ8TC44 478 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 SEMA5BQ9P283 1151 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 CKLFQ9UBR5 152 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 KLK11Q9UBX7 282 aa9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 NXT1Q9UKK6 140 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-202ENST00000340209 MGAQ8IWI9 3026 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 UPK3AO75631 287 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 KDM4BO94953 1096 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 TNFSF15O95150 251 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 CCNOP22674 350 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 SLC25A1P53007 311 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 CLDN20P56880 219 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 STPG1Q5TH74 334 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 LINC00299Q6ZSB3 139 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 OR13C9Q8NGT0 318 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 MICU1Q9BPX6 476 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 CHIAQ9BZP6 476 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 ATG5Q9H1Y0 275 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 FARSAQ9Y285 508 aaKnown RBP9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 TRAV18A0A075B6X5 111 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 LOC107986453A0A1B0GWG9 222 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 OR2M5A3KFT3 312 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 CENPXA8MT69 81 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 SLC43A1O75387 559 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 TDGF1P13385 188 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 AVPR2P30518 371 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 SNRPD2P62316 118 aaKnown RBP9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 ACSM1Q08AH1 577 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 GPR176Q14439 515 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 C3AR1Q16581 482 aa9.09□□□□□ -0.95
RBFOX1-202ENST00000340209 HES3Q5TGS1 186 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms