RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 GLAP06280 429 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 HCKP08631 526 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 FREM3P0C091 2139 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 NME2P22392 152 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 GALP22466 123 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 TAS2R19P59542 299 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM184AQ6ZMB5 413 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 SLC16A9Q7RTY1 509 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 BCORP1Q8N888 145 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 SLC37A2Q8TED4 501 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 FAM71F1Q96KD3 344 aaPredicted RBP12.83□□□□□ -0.36
PCDH8-201ENST00000338862 C12orf57Q99622 126 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 PCDHB10Q9UN67 800 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 HEATR5AQ86XA9 2040 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM269A0A1B0GVZ9 245 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 CTRB1P17538 263 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 ACAA2P42765 397 aaKnown RBP12.82□□□□□ -0.36
PCDH8-201ENST00000338862 CD226Q15762 336 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 CTRB2Q6GPI1 263 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 KLHL24Q6TFL4 600 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 MCATQ8IVS2 390 aaKnown RBP12.82□□□□□ -0.36
PCDH8-201ENST00000338862 CA13Q8N1Q1 262 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 SLC2A12Q8TD20 617 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 PMM1Q92871 262 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 GFI1Q99684 422 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 PLA2G2FQ9BZM2 168 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 BANF2Q9H503 90 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 C12orf10Q9HB07 376 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 RP1L1Q8IWN7 2480 aaPredicted RBP12.82□□□□□ -0.36
PCDH8-201ENST00000338862 PRUNE2Q8WUY3 3088 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 MFSD2BA6NFX1 497 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM200CA6NKL6 621 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 GPR89AB7ZAQ6 455 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 H7C417 338 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 SERPINA5P05154 406 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 GPR89BP0CG08 455 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 PDSS1Q5T2R2 415 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 SLC18B1Q6NT16 456 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 FGGYQ96C11 551 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 MAP3K3Q99759 626 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 CRB3Q9BUF7 120 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 MTFP1Q9UDX5 166 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 COL4A6Q14031 1691 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 OR5K3A6NET4 321 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 XRCC3O43542 346 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 HNRNPA1P09651 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
PCDH8-201ENST00000338862 H2BFMP0C1H6 154 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 ERGP11308 486 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 AGTR1P30556 359 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 C16orf47Q6ZP98 133 aaPredicted RBP12.82□□□□□ -0.36
PCDH8-201ENST00000338862 STOML3Q8TAV4 291 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 PLEKHA1Q9HB21 404 aa12.82□□□□□ -0.36
PCDH8-201ENST00000338862 COA3Q9Y2R0 106 aaPredicted RBP12.82□□□□□ -0.36
PCDH8-201ENST00000338862 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF878C9JN71 531 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 SDCBPO00560 298 aaPredicted RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 GALR3O60755 368 aaPredicted RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 GNB3P16520 340 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 CD53P19397 219 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 NTSR1P30989 418 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 MRPS10P82664 201 aaKnown RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 DHRS2Q13268 280 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 SNTB1Q13884 538 aaKnown RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 TOMM34Q15785 309 aaPredicted RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 AWAT2Q6E213 333 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 KCTD18Q6PI47 426 aaPredicted RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 PARM1Q6UWI2 310 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 OR2W3Q7Z3T1 314 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 FBXO17Q96EF6 278 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF701Q9NV72 531 aaPredicted RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 VSX1Q9NZR4 365 aaPredicted RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 CYP8B1Q9UNU6 501 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM14AQ9Y6G1 99 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 J3QRE1 110 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 PRH1P02810 166 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 UBBP0CG47 229 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 UBCP0CG48 685 aaKnown RBP12.81□□□□□ -0.36
PCDH8-201ENST00000338862 GP1BBP13224 206 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 FAM76BQ5HYJ3 339 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 ESX1Q8N693 406 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF321PQ8N8H1 164 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 ELP5Q8TE02 316 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 PNPLA2Q96AD5 504 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 DMRTA2Q96SC8 542 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 FAM83CQ9BQN1 747 aa12.81□□□□□ -0.36
PCDH8-201ENST00000338862 ERCC1P07992 297 aaPredicted RBP12.8□□□□□ -0.36
PCDH8-201ENST00000338862 BDKRB2P30411 391 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 RBM34P42696 430 aaKnown RBP12.8□□□□□ -0.36
PCDH8-201ENST00000338862 SLC6A9P48067 706 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 EBPQ15125 230 aaKnown RBP12.8□□□□□ -0.36
PCDH8-201ENST00000338862 OR1S1Q8NH92 325 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 S100A13Q99584 98 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 PHB2Q99623 299 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 NPAS1Q99742 590 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 MAFFQ9ULX9 164 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 LOC100289279A0A1B0GTE1 492 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 SNRPGP15A8MWD9 76 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 TXNL1O43396 289 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms