RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 SLC35F1Q5T1Q4 408 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 FOXL2NBQ6ZUU3 175 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 PTCHD4Q6ZW05 846 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 TMEM179BQ7Z7N9 219 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 SYT9Q86SS6 491 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 ZDHHC13Q8IUH4 622 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 MUC15Q8N387 334 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 OR5K1Q8NHB7 308 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 HTRA1Q92743 480 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 UTP4Q969X6 686 aaKnown RBP13.72□□□□□ -0.21
MRPL55-202ENST00000336300 NABP1Q96AH0 204 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 NUAK2Q9H093 628 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 SRA1Q9HD15 236 aaKnown RBP13.72□□□□□ -0.21
MRPL55-202ENST00000336300 POLE4Q9NR33 117 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 KLHL21Q9UJP4 597 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 COA3Q9Y2R0 106 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-202ENST00000336300 TIMM10BQ9Y5J6 103 aa13.72□□□□□ -0.21
MRPL55-202ENST00000336300 IGHV2OR16-5A0A0B4J2B6 119 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 G3V2T6 193 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 BHLHE40O14503 412 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 SOX14O95416 240 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 DANCRP0C864 163 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 POU1F1P28069 291 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 APLNRP35414 380 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 GLO1Q04760 184 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 DAG1Q14118 895 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 ETFDHQ16134 617 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 TBC1D28Q2M2D7 210 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 SLC36A3Q495N2 470 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 ZFP1Q6P2D0 407 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 LNX2Q8N448 690 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 SLC30A7Q8NEW0 376 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 SDR9C7Q8NEX9 313 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 NUP37Q8NFH4 326 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 FGFBP3Q8TAT2 258 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 TRMT61AQ96FX7 289 aaKnown RBP13.71□□□□□ -0.21
MRPL55-202ENST00000336300 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 PLA2G12AQ9BZM1 189 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 HEATR1Q9H583 2144 aaKnown RBP13.71□□□□□ -0.21
MRPL55-202ENST00000336300 NTN4Q9HB63 628 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 CDH20Q9HBT6 801 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 NOX3Q9HBY0 568 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.21
MRPL55-202ENST00000336300 B9D1Q9UPM9 204 aa13.71□□□□□ -0.21
MRPL55-202ENST00000336300 ROS1P08922 2347 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 CADP27708 2225 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 RIIAD1A6NNX1 92 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 OSMP13725 252 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 ZNF23P17027 643 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 ZNF32P17041 273 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 PRKACGP22612 351 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 CALCRP30988 508 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 LSM6P62312 80 aaKnown RBP13.7□□□□□ -0.22
MRPL55-202ENST00000336300 KPNB1Q14974 876 aaKnown RBP13.7□□□□□ -0.22
MRPL55-202ENST00000336300 PGGHGQ32M88 737 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 PABPC1L2AQ5JQF8 200 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 SLC27A4Q6P1M0 643 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 VHLLQ6RSH7 139 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 UNQ6126/PRO20091Q6UXV3 157 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 HS3ST5Q8IZT8 346 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 LRRC75A-AS1Q8N1F1 130 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 SVOPLQ8N434 492 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 OR10H5Q8NGA6 315 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 FBXO17Q96EF6 278 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 ZNF75AQ96N20 296 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 GRIP2Q9C0E4 1043 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 RACGAP1Q9H0H5 632 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 CA10Q9NS85 328 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 FBXO9Q9UK97 447 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-202ENST00000336300 FKBP7Q9Y680 259 aa13.7□□□□□ -0.22
MRPL55-202ENST00000336300 HLA-DQA2P01906 255 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 HMGN1P05114 100 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 SOD3P08294 240 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 IGFBP1P08833 259 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-202ENST00000336300 MMP7P09237 267 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-202ENST00000336300 ZNF35P13682 527 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 ZNF3P17036 446 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 NR4A1P22736 598 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 RPS23P62266 143 aaKnown RBP13.69□□□□□ -0.22
MRPL55-202ENST00000336300 SCRN3Q0VDG4 424 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 KRT80Q6KB66 452 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 B3GLCTQ6Y288 498 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 DTX2Q86UW9 622 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 MYPOPQ86VE0 399 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-202ENST00000336300 ZNF584Q8IVC4 421 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 OR6V1Q8N148 313 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 NPEPL1Q8NDH3 523 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 OR8D4Q8NGM9 314 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 OR2T4Q8NH00 348 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 PYDC1Q8WXC3 89 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 LRTOMTQ8WZ04 291 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 CENPNQ96H22 339 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-202ENST00000336300 FOXN4Q96NZ1 517 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 TSSK2Q96PF2 358 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 TRAF4Q9BUZ4 470 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-202ENST00000336300 ZNF416Q9BWM5 594 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 CDADC1Q9BWV3 514 aa13.69□□□□□ -0.22
MRPL55-202ENST00000336300 PAPOLBQ9NRJ5 636 aaKnown RBP13.69□□□□□ -0.22
MRPL55-202ENST00000336300 EIF3KQ9UBQ5 218 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms