RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 PLPP3O14495 311 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 RBBP9O75884 186 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 CD3DP04234 171 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 CALCBP10092 127 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 GRK1Q15835 563 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 SGCBQ16585 318 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 DCXRQ7Z4W1 244 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 PHYHIPQ92561 330 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 FAM46BQ96A09 425 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 NXPE2Q96DL1 559 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 C5orf34Q96MH7 638 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 CMKLR1Q99788 373 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 A8MVM7 634 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 P2RX3P56373 397 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 RTN4RL2Q86UN3 420 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 ZNF679Q8IYX0 411 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 ZNF519Q8TB69 540 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 GGT3PA6NGU5 568 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 POM121CA8CG34 1229 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 P2RY10O00398 339 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 FADS1O60427 444 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 RAB40ALP0C0E4 278 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 EGR3Q06889 387 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 RAB11BQ15907 218 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 CSRP2Q16527 193 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 EMC4Q5J8M3 183 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 CARD17Q5XLA6 110 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 OGFOD3Q6PK18 319 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 RAB40AQ8WXH6 277 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 ELMOD3Q96FG2 381 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 SLC25A44Q96H78 314 aaPredicted RBP13.32□□□□□ -0.28
UBA1-201ENST00000335972 MICU1Q9BPX6 476 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 TXNIPQ9H3M7 391 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 TMEM138Q9NPI0 162 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 TMEM14AQ9Y6G1 99 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 TMEM272A0A1B0GTI8 110 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 ECDO95905 644 aaPredicted RBP13.32□□□□□ -0.28
UBA1-201ENST00000335972 TPOP07202 933 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 GLULP15104 373 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 POU3F2P20265 443 aaPredicted RBP13.32□□□□□ -0.28
UBA1-201ENST00000335972 AP3S2P59780 193 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 ANGPT1Q15389 498 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 SFRP5Q5T4F7 317 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 FGD2Q7Z6J4 655 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 TMED4Q7Z7H5 227 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 ELMOD2Q8IZ81 293 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 OR1J4Q8NGS1 313 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 MCHR2Q969V1 340 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 ZNF501Q96CX3 271 aaPredicted RBP13.32□□□□□ -0.28
UBA1-201ENST00000335972 CMBLQ96DG6 245 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 SPACA5Q96QH8 159 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 C7orf50Q9BRJ6 194 aaKnown RBP13.32□□□□□ -0.28
UBA1-201ENST00000335972 PHF7Q9BWX1 381 aaPredicted RBP13.32□□□□□ -0.28
UBA1-201ENST00000335972 MFRPQ9BY79 579 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 PLEKHA1Q9HB21 404 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 SCP2D1Q9UJQ7 156 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 GALNSP34059 522 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 RASGEF1BQ0VAM2 473 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 MOGAT2Q3SYC2 334 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 C17orf107Q6ZR85 190 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 TDHQ8IZJ6 230 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 D2HGDHQ8N465 521 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 FAM109AQ8N4B1 249 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 UCK1Q9HA47 277 aa13.32□□□□□ -0.28
UBA1-201ENST00000335972 MRPS18BQ9Y676 258 aaKnown RBP13.32□□□□□ -0.28
UBA1-201ENST00000335972 URB1O60287 2271 aaKnown RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 ICMTO60725 284 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 SLC2A1P11166 492 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 ZNF250P15622 560 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 RIDAP52758 137 aaKnown RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 COX15Q7KZN9 410 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 OR6C1Q96RD1 312 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 B3GNT4Q9C0J1 378 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 ACTR6Q9GZN1 396 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 AKAP7Q9P0M2 348 aaPredicted RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 PIPOXQ9P0Z9 390 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 FARSAQ9Y285 508 aaKnown RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 CACNA1EQ15878 2313 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 BCAT2O15382 392 aaPredicted RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 XRCC3O43542 346 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 AP2S1P53680 142 aaPredicted RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 FOXF1Q12946 379 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 TMEM225Q6GV28 225 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 GLDNQ6ZMI3 551 aaPredicted RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 ZNF574Q6ZN55 896 aaPredicted RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 GRINAQ7Z429 371 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 GPAT4Q86UL3 456 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 ACBD4Q8NC06 268 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 OR13C3Q8NGS6 347 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 ASB5Q8WWX0 329 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 TRBV11-1A0A0K0K1C0 115 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 NPIPA5E9PKD4 350 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 MS4A18H0YCH9 400 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 EIF4E2O60573 245 aaKnown RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 KLK2P20151 261 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 PNLIPRP2P54317 469 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 NKPD1Q17RQ9 610 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 MS4A18Q3C1V0 323 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 METTL11BQ5VVY1 283 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms