RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 TMPRSS13Q9BYE2 586 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 TPSD1Q9BZJ3 242 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 BCO1Q9HAY6 547 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 SNRNP200O75643 2136 aaKnown RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 IGKV1-8A0A0C4DH67 115 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 TMEM272A0A1B0GTI8 110 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 LDLRAD4O15165 306 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 LRP3O75074 770 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 OR2C1O95371 312 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 ZIC2O95409 532 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 TSPAN15O95858 294 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 ZGLP1P0C6A0 271 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 ZNF888P0CJ79 500 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 ACKR3P25106 362 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 MAPK3P27361 379 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 FOXK2Q01167 660 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 MAPK14Q16539 360 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 JMJD6Q6NYC1 403 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 ABHD17CQ6PCB6 329 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 PSRC1Q6PGN9 363 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 GALNTL5Q7Z4T8 443 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 GID4Q8IVV7 300 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 BAP18Q8IXM2 172 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 GJD3Q8N144 294 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 OR52E1Q8NGJ3 308 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 OR2A1Q8NGT9 310 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 BPIFA2Q96DR5 249 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 SEC11CQ9BY50 192 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 ACTRT3Q9BYD9 372 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 DOK5Q9P104 306 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 GDF2Q9UK05 429 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 MMACHCQ9Y4U1 282 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 CSAG2Q9Y5P2 127 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 SNRPGP15A8MWD9 76 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 IDSB3KWA1 339 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 MOSPD3O75425 235 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 F10P00742 488 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 CPN1P15169 458 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 TUBG1P23258 451 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 RPL29P47914 159 aaKnown RBP10.79□□□□□ -0.68
LIMK2-202ENST00000333611 TAS2R20P59543 309 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 RASGEF1BQ0VAM2 473 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 FBXO46Q6PJ61 603 aaPredicted RBP10.79□□□□□ -0.68
LIMK2-202ENST00000333611 WDR88Q6ZMY6 472 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 ZNF705AQ6ZN79 300 aaPredicted RBP10.79□□□□□ -0.68
LIMK2-202ENST00000333611 ACOT7LQ6ZUV0 252 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 TMEM104Q8NE00 496 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 TNFRSF13CQ96RJ3 184 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 ABRACLQ9P1F3 81 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 A0A1W2PPV9 198 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 CBY3A6NI87 242 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 ZNF727A8MUV8 499 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 GRXCR1A8MXD5 290 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 DNAJB6O75190 326 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 P2RY2P41231 377 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 RAB28P51157 221 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 EFNB1P98172 346 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 OR1Q1Q15612 314 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 C11orf87Q6NUJ2 197 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 C1QTNF2Q9BXJ5 285 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 PCBD2Q9H0N5 130 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 SEBOXQ9HB31 216 aaPredicted RBP10.79□□□□□ -0.68
LIMK2-202ENST00000333611 BCL2L10Q9HD36 194 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 PRR13Q9NZ81 148 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 APOBEC3BQ9UH17 382 aaKnown RBP10.79□□□□□ -0.68
LIMK2-202ENST00000333611 SEC16AO15027 2179 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 EREGO14944 169 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 CLEC3AO75596 197 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 FGF19O95750 216 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 IFNGP01579 166 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 OR4E1P0C645 316 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 SERPINF1P36955 418 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 HTR5AP47898 357 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 ARHGAP40Q5TG30 622 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 SLC48A1Q6P1K1 146 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 CARFQ8N187 725 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 ZNF485Q8NCK3 441 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 FOXRED1Q96CU9 486 aaPredicted RBP10.79□□□□□ -0.68
LIMK2-202ENST00000333611 KIRREL1Q96J84 757 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 APMAPQ9HDC9 416 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 CALML5Q9NZT1 146 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 IKZF2Q9UKS7 526 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 GPR34Q9UPC5 381 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 MED31Q9Y3C7 131 aa10.79□□□□□ -0.68
LIMK2-202ENST00000333611 RANBP2P49792 3224 aaKnown RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 TRAV14DV4A0A0A6YYC5 116 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 A0A1W2PP55 124 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 FAM221BA6H8Z2 402 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 TCF21O43680 179 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 PRKNO60260 465 aaPredicted RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 H2AFB1P0C5Y9 115 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 CCR4P51679 360 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 BPIFB3P59826 476 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 ELAVL3Q14576 367 aaKnown RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 ZNHIT3Q15649 155 aaPredicted RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 DECR1Q16698 335 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 OR2T2Q6IF00 324 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 DHRS11Q6UWP2 260 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 OCSTAMPQ9BR26 566 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 EPHX3Q9H6B9 360 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms