RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 GPR143P51810 404 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 ELOA3BQ3SY89 546 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 OR52W1Q6IF63 320 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CDPF1Q6NVV7 123 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 RNF44Q7L0R7 432 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 BAP18Q8IXM2 172 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 ELOA3Q8NG57 546 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 OR4N2Q8NGD1 307 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 RPS4Y2Q8TD47 263 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CA5BP1Q8WTZ4 195 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 C15orf40Q8WUR7 153 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 HIST1H2BAQ96A08 127 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 NECAB3Q96P71 396 aaPredicted RBP12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 AMELYQ99218 206 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 PARP12Q9H0J9 701 aaKnown RBP12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 SPHK2Q9NRA0 654 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 DZANK1Q9NVP4 752 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CGGBP1Q9UFW8 167 aaPredicted RBP12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 ENTPD2Q9Y5L3 495 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 hCG_1809904A0A1W2PP81 198 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 A0A1W2PPC1 479 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 A0A1W2PR64 198 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 A0A1W2PRV1 198 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 TMEM235A6NFC5 223 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 A6NLC8 198 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 GNRH1P01148 92 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CD1AP06126 327 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CD80P33681 288 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 GAS6Q14393 721 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 NCMAPQ5T1S8 102 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 KIRREL2Q6UWL6 708 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 PGAP1Q75T13 922 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 PRSS35Q8N3Z0 413 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 GVQW1Q8N7I0 195 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 WDR76Q9H967 626 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 SEBOXQ9HB31 216 aaPredicted RBP12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 OR4C45A6NMZ5 311 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 STMND1H3BQB6 276 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 GPR37O15354 613 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 MYOGP15173 224 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 TAS2R19P59542 299 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 OR2B8PP59922 312 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CXADRP78310 365 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 PJVKQ0ZLH3 352 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 SQSTM1Q13501 440 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CEBPEQ15744 281 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 KRBOX4Q5JUW0 171 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 ASPHD2Q6ICH7 369 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 OR2G2Q8NGZ5 317 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CXorf40AQ8TE69 158 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 RNF141Q8WVD5 230 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 SUSD6Q92537 303 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 MRGPRFQ96AM1 343 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 MRPL38Q96DV4 380 aaKnown RBP12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CFHR5Q9BXR6 569 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 POTEKPQ9BYX7 375 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 RPS10P5Q9NQ39 176 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 CYTL1Q9NRR1 136 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 UPB1Q9UBR1 384 aa12.17□□□□□ -0.46
CCDC88C-201ENST00000331194 TRBV5-5A0A0J9YX44 114 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 S100A8P05109 93 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 PRF1P14222 555 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 PEBP1P30086 187 aaKnown RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 ACAA2P42765 397 aaKnown RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 IL13RA1P78552 427 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 SRSF5Q13243 272 aaKnown RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 KLHL26Q53HC5 615 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 EEF1A1P5Q5VTE0 462 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 BEND4Q6ZU67 534 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 DPY19L4Q7Z388 723 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 RTN4RL2Q86UN3 420 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 OR4K17Q8NGC6 315 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 TSEN15Q8WW01 171 aaKnown RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 CYYR1Q96J86 154 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 AKR1E2Q96JD6 320 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 CHRDQ9H2X0 955 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 KLK13Q9UKR3 277 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 SLC22A13Q9Y226 551 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 ZNF736B4DX44 427 aaPredicted RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 H0YIZ8 118 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 TGM5O43548 720 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 F13BP05160 661 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 HEXAP06865 529 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 CT62P0C5K7 136 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 EN2P19622 333 aaPredicted RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 RPS4Y1P22090 263 aaKnown RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 P2RY4P51582 365 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 TDGQ13569 410 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 CLINT1Q14677 625 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 OR2B11Q5JQS5 317 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 FAM220AQ7Z4H9 259 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 PPP1R3BQ86XI6 285 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 ZSCAN4Q8NAM6 433 aaPredicted RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 FAM174AQ8TBP5 190 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 CMBLQ96DG6 245 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 IP6K3Q96PC2 410 aa12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 ELF4Q99607 663 aaPredicted RBP12.16□□□□□ -0.46
CCDC88C-201ENST00000331194 MMP26Q9NRE1 261 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms