RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RIPPLY2Q5TAB7 128 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 USP43Q70EL4 1123 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 SLC16A9Q7RTY1 509 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 LHFPL3Q86UP9 236 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 GGNQ86UU5 652 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 RELL2Q8NC24 303 aaPredicted RBP14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 OR10H4Q8NGA5 316 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 ALG8Q9BVK2 526 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 NAA50Q9GZZ1 169 aaKnown RBP14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 TMEM185BQ9H7F4 350 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 CALHM2Q9HA72 323 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 TRIM36Q9NQ86 728 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 RPRD1BQ9NQG5 326 aaKnown RBP14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 COQ3Q9NZJ6 369 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 CLCF1Q9UBD9 225 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 STUB1Q9UNE7 303 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 MBD3L4A6NDZ8 208 aaPredicted RBP14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 MBD3L3A6NE82 208 aaPredicted RBP14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 MBD3L5A6NJ08 208 aaPredicted RBP14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 CD1AP06126 327 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 POU3F2P20265 443 aaPredicted RBP14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 PTGER4P35408 488 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 TIMP3P35625 211 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 POU4F3Q15319 338 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 BCL2A1Q16548 175 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 LINC01590Q5TEZ4 76 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 SLC35D2Q76EJ3 337 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 UEVLDQ8IX04 471 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 PHC2Q8IXK0 858 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 ATP6V1C2Q8NEY4 427 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 MBD3L2Q8NHZ7 208 aaPredicted RBP14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 TIGARQ9NQ88 270 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 TAS2R16Q9NYV7 291 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 SSR3Q9UNL2 185 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 SPG11Q96JI7 2443 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 HCFC1P51610 2035 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 ARPC4-TTLL3A0A0A6YYG9 625 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 ZNF670-ZNF695F2Z2N8 137 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 TACSTD2P09758 323 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 GABRA5P31644 462 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 RAC3P60763 192 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 H3F3AP84243 136 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 SNTB1Q13884 538 aaKnown RBP14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 DGUOKQ16854 277 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 CCDC58Q4VC31 144 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 TMEM225Q6GV28 225 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 ESPNLQ6ZVH7 1005 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 SLC35F2Q8IXU6 374 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 ZFAND2BQ8WV99 257 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 ASB5Q8WWX0 329 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 ASB10Q8WXI3 467 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 GATAD2BQ8WXI9 593 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 KLHL15Q96M94 604 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 RBP7Q96R05 134 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 SF3B5Q9BWJ5 86 aaKnown RBP14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 A3GALT2U3KPV4 340 aa14.57□□□□□ -0.08
PDLIM1-201ENST00000329399 ANKHD1Q8IWZ3 2542 aaKnown RBP14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 A0A0J9YW62 118 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 SLC22A23A1A5C7 686 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 CLUP10909 449 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 BMP5P22003 454 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 GADD45AP24522 165 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 CDONQ4KMG0 1287 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 THEM4Q5T1C6 240 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 NHLRC1Q6VVB1 395 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 PLEKHG7Q6ZR37 379 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 GCNT2Q8N0V5 402 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 ACBD4Q8NC06 268 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 OR6X1Q8NH79 312 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 ZMYND19Q96E35 227 aaPredicted RBP14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 ADGRG7Q96K78 797 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 UCN2Q96RP3 112 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 PAQR5Q9NXK6 330 aaPredicted RBP14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 B9D1Q9UPM9 204 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 GSTK1Q9Y2Q3 226 aa14.56□□□□□ -0.08
PDLIM1-201ENST00000329399 A0A1W2PPW3 197 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 PDZD2O15018 2839 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 AKR7A3O95154 331 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 HLA-DPB1P04440 258 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 GYPBP06028 91 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 ZNF43P17038 809 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 PCSK6P29122 969 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 P2RY4P51582 365 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 GLO1Q04760 184 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 SSX1Q16384 188 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 OR2G6Q5TZ20 316 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 SHFQ7M4L6 423 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 ZNF295-AS1Q8N0V1 137 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 OR6V1Q8N148 313 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 TMEM99Q8N816 258 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 ZNF454Q8N9F8 522 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 OR6K6Q8NGW6 343 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 FNDC9Q8TBE3 224 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 SPRYD4Q8WW59 207 aaPredicted RBP14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 ASB17Q8WXJ9 295 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 INTS12Q96CB8 462 aaKnown RBP14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 DACH2Q96NX9 599 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 KCNK17Q96T54 332 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 SRA1Q9HD15 236 aaKnown RBP14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 KCNJ16Q9NPI9 418 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms