RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SLC18B1Q6NT16 456 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 P4HA3Q7Z4N8 544 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 CDH26Q8IXH8 852 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 ZNF75AQ96N20 296 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 MCOLN1Q9GZU1 580 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 TMEM14AQ9Y6G1 99 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 RANBP2P49792 3224 aaKnown RBP13.9□□□□□ -0.18
VARS2-201ENST00000321897 AKAP6Q13023 2319 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 CCDC163A0A0D9SF12 145 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 AIPO00170 330 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 TLX3O43711 291 aaPredicted RBP13.9□□□□□ -0.18
VARS2-201ENST00000321897 ADH6P28332 368 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 SLC22A6Q4U2R8 563 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 SEZ6L2Q6UXD5 910 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 COX15Q7KZN9 410 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 OR5T2Q8NGG2 359 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 OR13C9Q8NGT0 318 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 BAHD1Q8TBE0 780 aaPredicted RBP13.9□□□□□ -0.18
VARS2-201ENST00000321897 SMIM4Q8WVI0 70 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 COX14Q96I36 57 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 C10orf90Q96M02 699 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 SORCS2Q96PQ0 1159 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 LHX9Q9NQ69 397 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 CMC2Q9NRP2 79 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 DUSP22Q9NRW4 184 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 EMC9Q9Y3B6 208 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 BDP1A6H8Y1 2624 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 SCN5AQ14524 2016 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 TMEM269A0A1B0GVZ9 245 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 MCRIP1C9JLW8 97 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 HCRTR1O43613 425 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 WDPCPO95876 746 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 ABCA11PQ4W5N1 156 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 RPL22L1Q6P5R6 122 aaKnown RBP13.9□□□□□ -0.18
VARS2-201ENST00000321897 PLXDC1Q8IUK5 500 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 ZNF565Q8N9K5 539 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 FBXO17Q96EF6 278 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 OR2A5Q96R48 311 aa13.9□□□□□ -0.18
VARS2-201ENST00000321897 A0A0D9SG52 128 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 VSTM2BA6NLU5 285 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 PLRG1O43660 514 aaKnown RBP13.9□□□□□ -0.19
VARS2-201ENST00000321897 ADRA2AP08913 450 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 RAB40ALP0C0E4 278 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 GLI4P10075 376 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 ICAM2P13598 275 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 ZNF273Q14593 569 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 CA13Q8N1Q1 262 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 RAB40AQ8WXH6 277 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 SLAMF9Q96A28 289 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 CA10Q9NS85 328 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 ANKRD36A6QL64 1941 aa13.9□□□□□ -0.19
VARS2-201ENST00000321897 HEATR5BQ9P2D3 2071 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 CACNA1DQ01668 2161 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 TSPAN11A1L157 253 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 KLK3P07288 261 aaPredicted RBP13.89□□□□□ -0.19
VARS2-201ENST00000321897 GABRG2P18507 467 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 KCNJ3P48549 501 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 SRYQ05066 204 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 WBP2NLQ6ICG8 309 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 DNM1P34Q6PK57 102 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 NAA40Q86UY6 237 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 FAM219AQ8IW50 185 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 ZNF576Q9H609 170 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 OR5H14A6NHG9 310 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 PI3P19957 117 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 KIAA0895LQ68EN5 471 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 GLRX5Q86SX6 157 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 OR4C16Q8NGL9 310 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 FAM86C1Q9NVL1 165 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 ZMAT5Q9UDW3 170 aaKnown RBP13.89□□□□□ -0.19
VARS2-201ENST00000321897 PCDHB10Q9UN67 800 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 FAM96BQ9Y3D0 163 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 OR2T7P0C7T2 308 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 HYAL1Q12794 435 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 DUSP8Q13202 625 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 SERTAD2Q14140 314 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 ABHD12BQ7Z5M8 362 aaPredicted RBP13.89□□□□□ -0.19
VARS2-201ENST00000321897 OR2T27Q8NH04 317 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 TMEM234Q8WY98 164 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
VARS2-201ENST00000321897 OR51B6Q9H340 312 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 KCNJ16Q9NPI9 418 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 MED29Q9NX70 200 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 IL20Q9NYY1 176 aa13.89□□□□□ -0.19
VARS2-201ENST00000321897 DOCK4Q8N1I0 1966 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 SYT7O43581 403 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 CTNSO60931 367 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 CSTBP04080 98 aaKnown RBP13.88□□□□□ -0.19
VARS2-201ENST00000321897 SPI1P17947 270 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 AMY2BP19961 511 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 CDK5Q00535 292 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 EEF1A2Q05639 463 aaKnown RBP13.88□□□□□ -0.19
VARS2-201ENST00000321897 SSX9Q7RTT3 188 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 BCORP1Q8N888 145 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 TOMM40LQ969M1 308 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 MRPL38Q96DV4 380 aaKnown RBP13.88□□□□□ -0.19
VARS2-201ENST00000321897 SCMH1Q96GD3 660 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 GPR137Q96N19 417 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 NPAS1Q99742 590 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 MDC1Q14676 2089 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms