RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 C11orf40Q8WZ69 217 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 JMJD8Q96S16 334 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 KCTD14Q9BQ13 255 aaPredicted RBP12.11□□□□□ -0.47
RPP40-201ENST00000319533 MRPL13Q9BYD1 178 aaKnown RBP12.11□□□□□ -0.47
RPP40-201ENST00000319533 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 SPAG4Q9NPE6 437 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 NANSQ9NR45 359 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 TAGLN3Q9UI15 199 aa12.11□□□□□ -0.47
RPP40-201ENST00000319533 A0A0G2JMP0 313 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 A0A0X1KG70 313 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 RNF13O43567 381 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 CDC14BO60729 498 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 MPZL1O95297 269 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 CH25HO95992 272 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 FSHBP01225 129 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 IGHV3-13P01766 116 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 HIST1H2ABP04908 130 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 CCL2P13500 99 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 RBM34P42696 430 aaKnown RBP12.1□□□□□ -0.47
RPP40-201ENST00000319533 OR1E2P47887 323 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 GSK3BP49841 420 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 PSME3P61289 254 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 MVKQ03426 396 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 MELKQ14680 651 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 MOGQ16653 247 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 TBC1D28Q2M2D7 210 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 C8orf82Q6P1X6 216 aaPredicted RBP12.1□□□□□ -0.47
RPP40-201ENST00000319533 HIST3H2AQ7L7L0 130 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 SLC16A14Q7RTX9 510 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 TSPYL5Q86VY4 417 aaPredicted RBP12.1□□□□□ -0.47
RPP40-201ENST00000319533 C3orf56Q8N813 242 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 OR4M2Q8NGB6 313 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 GCDHQ92947 438 aaPredicted RBP12.1□□□□□ -0.47
RPP40-201ENST00000319533 HIST1H2ACQ93077 130 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 MCHR2Q969V1 340 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 SLC7A6OSQ96CW6 309 aaPredicted RBP12.1□□□□□ -0.47
RPP40-201ENST00000319533 NSL1Q96IY1 281 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 SUCNR1Q9BXA5 334 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 RNF121Q9H920 327 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 WIPI2Q9Y4P8 454 aa12.1□□□□□ -0.47
RPP40-201ENST00000319533 GMNNO75496 209 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 ZNF682O95780 498 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 BCL10O95999 233 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 IGHG1P01857 330 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 IFNW1P05000 195 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 LCKP06239 509 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 THRBP10828 461 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 UMPSP11172 480 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 GATA3P23771 443 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 PIN1Q13526 163 aaPredicted RBP12.09□□□□□ -0.47
RPP40-201ENST00000319533 FAM209AQ5JX71 171 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 C10orf128Q5T292 105 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 AVPI1Q5T686 147 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 USP51Q70EK9 711 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 RBM15BQ8NDT2 890 aaKnown RBP12.09□□□□□ -0.47
RPP40-201ENST00000319533 GEMIN6Q8WXD5 167 aaKnown RBP12.09□□□□□ -0.47
RPP40-201ENST00000319533 FAM162AQ96A26 154 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 PRSS27Q9BQR3 290 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 LRMDAQ9H2I8 198 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 ADA2Q9NZK5 511 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 GMPR2Q9P2T1 348 aaKnown RBP12.09□□□□□ -0.47
RPP40-201ENST00000319533 ABCD2Q9UBJ2 740 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 RIMS3Q9UJD0 308 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 WNK2Q9Y3S1 2297 aa12.09□□□□□ -0.47
RPP40-201ENST00000319533 IQCMA0A1B0GVH7 501 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 CLDN25C9JDP6 229 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 ANKRD65E5RJM6 399 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 RGS9O75916 674 aaPredicted RBP12.08□□□□□ -0.48
RPP40-201ENST00000319533 SERPINA1P01009 418 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 IGF2P01344 180 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 ADH4P08319 380 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 TSPAN19P0C672 248 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 CALB2P22676 271 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 MMP15P51511 669 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 ZNF84P51523 738 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 PLP2Q04941 152 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 ST3GAL3Q11203 375 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 IFI44LQ53G44 452 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 FKBP9P1Q75LS8 142 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 NANOGNBQ7Z5D8 188 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 ZDHHC22Q8N966 263 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 CPEB3Q8NE35 698 aaKnown RBP12.08□□□□□ -0.48
RPP40-201ENST00000319533 NOXO1Q8NFA2 376 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 TMEM239Q8WW34 195 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 GTF3AQ92664 365 aaKnown RBP12.08□□□□□ -0.48
RPP40-201ENST00000319533 RAB1CQ92928 201 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 PRRC1Q96M27 445 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 ZNF347Q96SE7 839 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 OR51B6Q9H340 312 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 SIAEQ9HAT2 523 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 ESM1Q9NQ30 184 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 MEPEQ9NQ76 525 aaPredicted RBP12.08□□□□□ -0.48
RPP40-201ENST00000319533 DECR2Q9NUI1 292 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 OPN4Q9UHM6 478 aa12.08□□□□□ -0.48
RPP40-201ENST00000319533 CACNG2Q9Y698 323 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms