RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 M0R129 80 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 OVOL3O00110 214 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 CRYAAP02489 173 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 EPHA2P29317 976 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 PTH2RP49190 550 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 PRSS12P56730 875 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 MRPS34P82930 218 aaKnown RBP10.4□□□□□ -0.74
SCFD1-201ENST00000311943 ALKBH6Q3KRA9 238 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 THEM4Q5T1C6 240 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 ZNF101Q8IZC7 436 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 MUC15Q8N387 334 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 GIPC3Q8TF64 312 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 RBP7Q96R05 134 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 DDOQ99489 341 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 FOXC2Q99958 501 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 TSSK6Q9BXA6 273 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 CACNG6Q9BXT2 260 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 WNT5BQ9H1J7 359 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 CXXC4Q9H2H0 198 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 SMURF2Q9HAU4 748 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 POLE4Q9NR33 117 aa10.4□□□□□ -0.74
SCFD1-201ENST00000311943 TMEM129A0AVI4 362 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 XKRYO14609 159 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 IGHV4-39P01824 125 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 TFP02787 698 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 OR4A8P0C604 315 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 POU1F1P28069 291 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 ARR3P36575 388 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 ZNF84P51523 738 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 SNTB2Q13425 540 aaKnown RBP10.4□□□□□ -0.75
SCFD1-201ENST00000311943 MAD2L1BPQ15013 274 aaPredicted RBP10.4□□□□□ -0.75
SCFD1-201ENST00000311943 Q5PR19 223 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 SPATA46Q5T0L3 261 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 ACSM5Q6NUN0 579 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 CCDC121Q6ZUS5 278 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 LINC00346Q8IVM7 164 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 NPEPL1Q8NDH3 523 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 C11orf40Q8WZ69 217 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 GTF3AQ92664 365 aaKnown RBP10.4□□□□□ -0.75
SCFD1-201ENST00000311943 NINJ1Q92982 152 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 ALG12Q9BV10 488 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 SIAEQ9HAT2 523 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 IL20Q9NYY1 176 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 CDH10Q9Y6N8 788 aa10.4□□□□□ -0.75
SCFD1-201ENST00000311943 MED13LQ71F56 2210 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 IGLV1-36A0A0B4J1U3 117 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 TVP23AA6NH52 213 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 RER1O15258 196 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 SMPD2O60906 423 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 E2F6O75461 281 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 GOSR1O95249 250 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 STAMBPO95630 424 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 TXNDC12O95881 172 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 CLPTM1O96005 669 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 NGFP01138 241 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 SERPINA5P05154 406 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 DBHP09172 617 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 SLC6A6P31641 620 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 POLR2IP36954 125 aaKnown RBP10.39□□□□□ -0.75
SCFD1-201ENST00000311943 WNT5AP41221 380 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCFD1-201ENST00000311943 CRMP1Q14194 572 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 FAM27BQ5VT28 67 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 RASSF6Q6ZTQ3 369 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 Q71RC1 249 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-201ENST00000311943 SVOPLQ8N434 492 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 ICA1LQ8NDH6 482 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 TMEM171Q8WVE6 324 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 MBD6Q96DN6 1003 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 Q96MF0 132 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 DHRS9Q9BPW9 319 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 SYT3Q9BQG1 590 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 GSX1Q9H4S2 264 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-201ENST00000311943 OBP2BQ9NPH6 170 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 TBC1D23Q9NUY8 699 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 VSX1Q9NZR4 365 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-201ENST00000311943 B9D1Q9UPM9 204 aa10.39□□□□□ -0.75
SCFD1-201ENST00000311943 HTR3EA5X5Y0 456 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 A6NIZ1 184 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 RAB36O95755 333 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 DAPP51397 102 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 RPS6KA3P51812 740 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 ATP5J2P56134 94 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 RAP1BP61224 184 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 RAP1AP62834 184 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 C20orf204Q6ZNR8 217 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 FOXL2NBQ6ZUU3 175 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 SLC37A3Q8NCC5 494 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 SLC30A7Q8NEW0 376 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 MRPL37Q9BZE1 423 aaKnown RBP10.38□□□□□ -0.75
SCFD1-201ENST00000311943 POFUT1Q9H488 388 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 ASH2LQ9UBL3 628 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 ZFHX3Q15911 3703 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 H3BN98 237 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 H3BNX3 289 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 ENTPD5O75356 428 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 ATP5HO75947 161 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 UBL3O95164 117 aa10.38□□□□□ -0.75
SCFD1-201ENST00000311943 GAAP10253 952 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms