RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PLPPR5Q32ZL2 321 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 SLC25A53Q5H9E4 307 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 GPR157Q5UAW9 335 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 VASNQ6EMK4 673 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 GFRALQ6UXV0 394 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 Q6ZPB1 254 aaPredicted RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 LYSMD2Q8IV50 215 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 ZNF440Q8IYI8 595 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 GTPBP8Q8N3Z3 284 aaPredicted RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 OR10H4Q8NGA5 316 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 OR14L1PQ8NHC6 308 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 RASSF5Q8WWW0 418 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 TAMM41Q96BW9 452 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 GPA33Q99795 319 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 KCTD14Q9BQ13 255 aaPredicted RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 CDADC1Q9BWV3 514 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 GSX1Q9H4S2 264 aaPredicted RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 LDAHQ9H6V9 325 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 BCO1Q9HAY6 547 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 CACYBPQ9HB71 228 aaKnown RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 MED17Q9NVC6 651 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 TMEFF2Q9UIK5 374 aaPredicted RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 DKKL1Q9UK85 242 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 HELZ2Q9BYK8 2649 aaKnown RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 OR2M5A3KFT3 312 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 GAGE10A6NGK3 116 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 LRRN3E7EW58 273 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 GSTA4O15217 222 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 CDC40O60508 579 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD6-201ENST00000309279 ACTL6AO96019 429 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 BMP7P18075 431 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 GGT1P19440 569 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 PGCP20142 388 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 HNF1AP20823 631 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 ACHEP22303 614 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 HSD11B1P28845 292 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 LGALS4P56470 323 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 AP3S2P59780 193 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 CXCR4P61073 352 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 HSF1Q00613 529 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 CRYZQ08257 329 aaKnown RBP7.35□□□□□ -1.23
CHD6-201ENST00000309279 MZT1Q08AG7 82 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 CEACAM7Q14002 265 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 TOMM34Q15785 309 aaPredicted RBP7.35□□□□□ -1.23
CHD6-201ENST00000309279 IGFBP7Q16270 282 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 PRAMEF5Q5TYX0 476 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 PRAMEF6Q5VXH4 476 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 PYHIN1Q6K0P9 492 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 PLEKHG7Q6ZR37 379 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 ZNF550Q7Z398 422 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 SPPL2CQ8IUH8 684 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 GPR32P1Q8NGA4 272 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 ST8SIA1Q92185 356 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 MYDGFQ969H8 173 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 PHF21AQ96BD5 680 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 MRGPRX4Q96LA9 322 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 TIMP4Q99727 224 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 NPAS1Q99742 590 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 VRK1Q99986 396 aaPredicted RBP7.35□□□□□ -1.23
CHD6-201ENST00000309279 HINT2Q9BX68 163 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 RAB1BQ9H0U4 201 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 MTCH1Q9NZJ7 389 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 SPRR3Q9UBC9 169 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 STOML1Q9UBI4 398 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 PRPF19Q9UMS4 504 aaKnown RBP7.35□□□□□ -1.23
CHD6-201ENST00000309279 VDAC3Q9Y277 283 aa7.35□□□□□ -1.23
CHD6-201ENST00000309279 DPPA5A6NC42 116 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 TMEM238C9JI98 176 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 PYCARD-AS1I3L0S3 204 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 CXCR6O00574 342 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 TOR1AO14656 332 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 CLOCKO15516 846 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 CYP7B1O75881 506 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 VAMP5O95183 116 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 WISP1O95388 367 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 NUDT14O95848 222 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 OPN1SWP03999 348 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 FCER2P06734 321 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 SBK2P0C263 348 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 GKN3PP0CG01 181 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 CPN1P15169 458 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 LHX2P50458 406 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 RASSF2P50749 326 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 ZNF136P52737 540 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 SELENOWP63302 87 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 RBPJQ06330 500 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 QPRTQ15274 297 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 NPTX1Q15818 432 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 GLYATQ6IB77 296 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 MYO7BQ6PIF6 2116 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 CBLL1Q75N03 491 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 CXXC5Q7LFL8 322 aaKnown RBP7.34□□□□□ -1.23
CHD6-201ENST00000309279 LUZP2Q86TE4 346 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 CATSPERDQ86XM0 798 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 RBM45Q8IUH3 476 aaKnown RBP7.34□□□□□ -1.23
CHD6-201ENST00000309279 RNF148Q8N7C7 305 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 OR52E4Q8NGH9 312 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 LHFPL5Q8TAF8 219 aa7.34□□□□□ -1.23
CHD6-201ENST00000309279 TMEM234Q8WY98 164 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms