RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 ANGPTL5Q86XS5 388 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 PRSS35Q8N3Z0 413 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 OR5B2Q96R09 309 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 PLEK2Q9NYT0 353 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 SLC23A2Q9UGH3 650 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 FGF17O60258 216 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 CNN3Q15417 329 aaKnown RBP17.64■□□□□ 0.41
USP48-201ENST00000308271 RNF212Q495C1 297 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 PLA1AQ53H76 456 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 EXOSC6Q5RKV6 272 aaKnown RBP17.64■□□□□ 0.41
USP48-201ENST00000308271 C11orf87Q6NUJ2 197 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 LINC00052Q96N35 136 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 ZBP1Q9H171 429 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 TMEM231Q9H6L2 316 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 KLHL13Q9P2N7 655 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 MTFP1Q9UDX5 166 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 FOXJ3Q9UPW0 622 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 CTDSPLO15194 276 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 GSTZ1O43708 216 aaPredicted RBP17.64■□□□□ 0.41
USP48-201ENST00000308271 SSX9Q7RTT3 188 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 KNL1Q8NG31 2342 aa17.64■□□□□ 0.41
USP48-201ENST00000308271 PTPRFP10586 1907 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 TMED7-TICAM2A0A0A6YYA0 188 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 ZNF705GA8MUZ8 300 aaPredicted RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 BPNT1O95861 308 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 IGHA1P01876 353 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 SNU13P55769 128 aaKnown RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 GPR137CQ8N3F9 429 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 BCL7CQ8WUZ0 217 aaPredicted RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 LCORQ96JN0 433 aaPredicted RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 LSM2Q9Y333 95 aaKnown RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 TMED7Q9Y3B3 224 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 PPM1DO15297 605 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 RPL27P61353 136 aaKnown RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 SNRPNP63162 240 aaKnown RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 ZNF266Q14584 549 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 CDONQ4KMG0 1287 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 B3GNTL1Q67FW5 361 aaPredicted RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 PLPP5Q8NEB5 264 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 EDAQ92838 391 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 FGF13Q92913 245 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 SLC46A1Q96NT5 459 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 NIPSNAP3BQ9BS92 247 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 MRPS18AQ9NVS2 196 aaKnown RBP17.63■□□□□ 0.41
USP48-201ENST00000308271 CDC14CA4D256 554 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 PRAMEF26H0Y7S4 382 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 ZNF44P15621 663 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 GJA4P35212 333 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 NDUFA6P56556 154 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 ACY1Q03154 408 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 MALLQ13021 153 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 LINC00346Q8IVM7 164 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 ZNF561Q8N587 486 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 TMEM229BQ8NBD8 167 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 HSD17B11Q8NBQ5 300 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 C17orf47Q8NEP4 570 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 ZNF286AQ9HBT8 521 aa17.63■□□□□ 0.41
USP48-201ENST00000308271 DOK2O60496 412 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 SFTPDP35247 375 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 FAM57BQ71RH2 274 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 MORN4Q8NDC4 146 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 LY75O60449 1722 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 LOC107986453A0A1B0GWG9 222 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 ITGB2P05107 769 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 OR1D4P47884 311 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 SELENOPP49908 381 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 MAT1AQ00266 395 aaKnown RBP17.62■□□□□ 0.41
USP48-201ENST00000308271 GLIPR1L1Q6UWM5 242 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 OR51Q1Q8NH59 317 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 JAM3Q9BX67 310 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 SIRT3Q9NTG7 399 aaPredicted RBP17.62■□□□□ 0.41
USP48-201ENST00000308271 B3GALT5Q9Y2C3 310 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 PLEKHM1Q9Y4G2 1056 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 A8MVM7 634 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 SLC17A2O00624 439 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 LBX1P52954 281 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 ZNF77Q15935 545 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 MAMSTRQ6ZN01 415 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 TRMT61AQ96FX7 289 aaKnown RBP17.62■□□□□ 0.41
USP48-201ENST00000308271 TSSK2Q96PF2 358 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 CHRDQ9H2X0 955 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 THAP10Q9P2Z0 257 aaPredicted RBP17.62■□□□□ 0.41
USP48-201ENST00000308271 DOCK5Q9H7D0 1870 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 GALR3O60755 368 aaPredicted RBP17.62■□□□□ 0.41
USP48-201ENST00000308271 ATG12O94817 140 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 CSNK1A1P48729 337 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 DCXRQ7Z4W1 244 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 METTL9Q9H1A3 318 aa17.62■□□□□ 0.41
USP48-201ENST00000308271 MBNL1Q9NR56 388 aaKnown RBP17.62■□□□□ 0.41
USP48-201ENST00000308271 MSTNO14793 375 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 SEMG1P04279 462 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 SRPXP78539 464 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 UBXN2BQ14CS0 331 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 OR9K2Q8NGE7 335 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 FBXW5Q969U6 566 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 ADGRL4Q9HBW9 690 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 PURGQ9UJV8 347 aaKnown RBP17.61■□□□□ 0.41
USP48-201ENST00000308271 BRINP1O60477 761 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 PRAMEF4O60810 478 aa17.61■□□□□ 0.41
USP48-201ENST00000308271 TLE4Q04727 773 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms