RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZNF14P17017 642 aaPredicted RBP9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PAICSP22234 425 aaKnown RBP9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 IGFBP5P24593 272 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GRK5P34947 590 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GALK2Q01415 458 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RAB39AQ14964 217 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ETFDHQ16134 617 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TBC1D28Q2M2D7 210 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FAM27BQ5VT28 67 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FAHD1Q6P587 224 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ALDH16A1Q8IZ83 802 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FBXL14Q8N1E6 418 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 IQCF1Q8N6M8 205 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF611Q8N823 705 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CYB561A3Q8NBI2 242 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SLC37A3Q8NCC5 494 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PROKR2Q8NFJ6 384 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR4F15Q8NGB8 312 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR1J2Q8NGS2 313 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR2T4Q8NH00 348 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TMEM171Q8WVE6 324 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NEUROG1Q92886 237 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PIGTQ969N2 578 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OTULINQ96BN8 352 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 WACQ9BTA9 647 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FN3KQ9H479 309 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CDH20Q9HBT6 801 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NOX3Q9HBY0 568 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SRA1Q9HD15 236 aaKnown RBP9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 REV1Q9UBZ9 1251 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OAZ3Q9UMX2 235 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SPEF1Q9Y4P9 236 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ORC6Q9Y5N6 252 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CRYBG3Q68DQ2 2970 aa9.56□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 IGHV2OR16-5A0A0B4J2B6 119 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ERICH4A6NGS2 130 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TP53P04637 393 aaPredicted RBP9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 HMGN1P05114 100 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SERPINA5P05154 406 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF32P17041 273 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FABP6P51161 128 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 DAPP51397 102 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 LSM6P62312 80 aaKnown RBP9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ESRRGP62508 458 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SCRN3Q0VDG4 424 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 AQP6Q13520 282 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CRMP1Q14194 572 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SYT9Q86SS6 491 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 MYPOPQ86VE0 399 aaPredicted RBP9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PARP8Q8N3A8 854 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NPEPL1Q8NDH3 523 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SLC30A7Q8NEW0 376 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SMAP2Q8WU79 429 aaPredicted RBP9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 MS4A3Q96HJ5 214 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TSSK2Q96PF2 358 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PKP2Q99959 881 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 DHRS9Q9BPW9 319 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RBM4BQ9BQ04 359 aaKnown RBP9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RBM4Q9BWF3 364 aaKnown RBP9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF416Q9BWM5 594 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OSBPL10Q9BXB5 764 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 LIME1Q9H400 295 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CXorf56Q9H5V9 222 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SLC25A19Q9HC21 320 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 S100A14Q9HCY8 104 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 EMC7Q9NPA0 242 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CMC2Q9NRP2 79 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ITGB1BP2Q9UKP3 347 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 B9D1Q9UPM9 204 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TIMM10BQ9Y5J6 103 aa9.55□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 IGLV1-36A0A0B4J1U3 117 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR6C68A6NDL8 312 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 VSTM5A8MXK1 200 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PRR23D1E9PI22 279 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 H3BNX3 289 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 DOK2O60496 412 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TMCC2O75069 709 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ATE1O95260 518 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 BAG2O95816 211 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 MMP7P09237 267 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PRR23D2P0DMB1 279 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF823P16415 610 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CCNOP22674 350 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CALCRP30988 508 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CRISP1P54107 249 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RPS23P62266 143 aaKnown RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SNTB2Q13425 540 aaKnown RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 DAG1Q14118 895 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ENDOGQ14249 297 aaKnown RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GINS1Q14691 196 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PABPC1L2AQ5JQF8 200 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 AGAP6Q5VW22 663 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 KDM4DQ6B0I6 523 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 KRT80Q6KB66 452 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF544Q6NX49 715 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 VHLLQ6RSH7 139 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 UNQ6126/PRO20091Q6UXV3 157 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 B3GLCTQ6Y288 498 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms