RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ZNF585AQ6P3V2 769 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 FOXRED2Q8IWF2 684 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 C17orf47Q8NEP4 570 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 SYT4Q9H2B2 425 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 PNO1Q9NRX1 252 aaKnown RBP9.92□□□□□ -0.82
LSM3-201ENST00000306024 ZNF275Q9NSD4 429 aaPredicted RBP9.92□□□□□ -0.82
LSM3-201ENST00000306024 IGKV1-8A0A0C4DH67 115 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 E9PQ18 207 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 LDB3O75112 727 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 ICOSLGO75144 302 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 RCBTB2O95199 551 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 PRF1P14222 555 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 BSGP35613 385 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 NDUFA6P56556 154 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 CCL7P80098 99 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 FCRL6Q6DN72 434 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 OR4D11Q8NGI4 311 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 METTL21AQ8WXB1 218 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 ZMYND19Q96E35 227 aaPredicted RBP9.92□□□□□ -0.82
LSM3-201ENST00000306024 RHOVQ96L33 236 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 OR2A5Q96R48 311 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 PDCD1LG2Q9BQ51 273 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 NOX4Q9NPH5 578 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 TMEM82A0PJX8 343 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 H7C1Q1 480 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 KLK3P07288 261 aaPredicted RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 CSF1P09603 554 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 APEHP13798 732 aaKnown RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 GALP22466 123 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 CDK2P24941 298 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 CD80P33681 288 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 LSSP48449 732 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 H2BFSP57053 126 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ACTC1P68032 377 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ACTA1P68133 377 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 RAE1P78406 368 aaKnown RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 BDH1Q02338 343 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 KIAA0141Q14154 515 aaPredicted RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 ERV3-1Q14264 604 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ENTPD8Q5MY95 495 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 FAM71E1Q6IPT2 247 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ZNF529Q6P280 563 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 VN1R4Q7Z5H5 301 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 SUN3Q8TAQ9 357 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 DGAT2Q96PD7 388 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 STRADBQ9C0K7 418 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 OR52D1Q9H346 318 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 NRIP3Q9NQ35 241 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 CUTCQ9NTM9 273 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 TNRC18O15417 2968 aaPredicted RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 UNC119BA6NIH7 251 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 SURF4O15260 269 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 RAB3DO95716 219 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 MAS1P04201 325 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 RAB40ALP0C0E4 278 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 FBLP22087 321 aaKnown RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 GLP1RP43220 463 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 MAGEB1P43366 347 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 TRA2BP62995 288 aaKnown RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 CLEC9AQ6UXN8 241 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ACOT7LQ6ZUV0 252 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ZNF227Q86WZ6 799 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 LRRC25Q8N386 305 aaPredicted RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 RAB40AQ8WXH6 277 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 OR6C1Q96RD1 312 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ACKR4Q9NPB9 350 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 A4GALTQ9NPC4 353 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 TMEM9BQ9NQ34 198 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 MED17Q9NVC6 651 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 FAM86C1Q9NVL1 165 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 A0A0C4DFX4 3053 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 TMEM72A0PK05 275 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 P2RX6O15547 441 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ZNF208O43345 1280 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 OR2A4O95047 310 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 HLA-AP01891 365 aaKnown RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 HPGDP15428 266 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 PRSS3P35030 304 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 P2RX1P51575 399 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 DHRS7BQ6IAN0 325 aaPredicted RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 RPL13AP3Q6NVV1 102 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 AMER3Q8N944 861 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ZNF565Q8N9K5 539 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 OR4C16Q8NGL9 310 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 SLC25A28Q96A46 364 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 ZBTB8AQ96BR9 441 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 NEURL3Q96EH8 262 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 RBM14Q96PK6 669 aaKnown RBP9.91□□□□□ -0.82
LSM3-201ENST00000306024 OR2A7Q96R45 310 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 UBQLN3Q9H347 655 aa9.91□□□□□ -0.82
LSM3-201ENST00000306024 OR2M5A3KFT3 312 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 IFNA6P05013 189 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 SPARCP09486 303 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 GRPRP30550 384 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 EIF5AP63241 154 aaKnown RBP9.9□□□□□ -0.82
LSM3-201ENST00000306024 PDZD11Q5EBL8 140 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 TMEM255AQ5JRV8 349 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 SLC25A30Q5SVS4 291 aa9.9□□□□□ -0.82
LSM3-201ENST00000306024 TMEM164Q5U3C3 297 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms