RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 FOXN4Q96NZ1 517 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 YAE1D1Q9NRH1 226 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 A0A1W2PPW3 197 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 FABP3P05413 133 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 IGFBP1P08833 259 aaPredicted RBP22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 STOMP27105 288 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 APEX1P27695 318 aaKnown RBP22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 LAP3P28838 519 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 UCP2P55851 309 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 SPIBQ01892 262 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 SEC23BQ15437 767 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 GPR139Q6DWJ6 353 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 ALDH16A1Q8IZ83 802 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 CPEB3Q8NE35 698 aaKnown RBP22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 GPX7Q96SL4 187 aaPredicted RBP22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 FUZQ9BT04 418 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 TPK1Q9H3S4 243 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 NRIP3Q9NQ35 241 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 GPR160Q9UJ42 338 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 ADAM21Q9UKJ8 722 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 FZR1Q9UM11 496 aa22.72■■□□□ 1.23
CDKN2A-201ENST00000304494 NAV3Q8IVL0 2385 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 PRSS37A4D1T9 235 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 H7C1C5 153 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 CRLF1O75462 422 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 LCKP06239 509 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 MSR1P21757 451 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 SDHAP31040 664 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 LCN6P62502 163 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 PSG4Q00888 419 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 GGTLC2Q14390 218 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 MESTQ5EB52 335 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 UNQ6126/PRO20091Q6UXV3 157 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 LRP11Q86VZ4 500 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 C11orf40Q8WZ69 217 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 WACQ9BTA9 647 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 IL1RAPQ9NPH3 570 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 TIMM10BQ9Y5J6 103 aa22.71■■□□□ 1.23
CDKN2A-201ENST00000304494 TEX13CA0A0J9YWL9 993 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 UNC119BA6NIH7 251 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 C12orf71A8MTZ7 269 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 A8MV72 311 aaPredicted RBP22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 STAMBPO95630 424 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 ZNF250P15622 560 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 CCNOP22674 350 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 ALDH3B1P43353 468 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 KRR1Q13601 381 aaKnown RBP22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 C6orf52Q5T4I8 152 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 DPY19L2P2Q6ZN68 376 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 SYT9Q86SS6 491 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 ZNF786Q8N393 782 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 CCDC197Q8NCU1 140 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 SYNPRQ8TBG9 265 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 UBASH3BQ8TF42 649 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 NSL1Q96IY1 281 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 OR2H1Q9GZK4 316 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 OR51B6Q9H340 312 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 POLE4Q9NR33 117 aa22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 MYEF2Q9P2K5 600 aaKnown RBP22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 EIF3KQ9UBQ5 218 aaKnown RBP22.7■■□□□ 1.22
CDKN2A-201ENST00000304494 B2RBV5 119 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 GIFP27352 417 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 IFNGR2P38484 337 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 GDI2P50395 445 aaKnown RBP22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 RPS6KA3P51812 740 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 KLF3P57682 345 aaPredicted RBP22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 NKPD1Q17RQ9 610 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 CYB5R2Q6BCY4 276 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 SMARCD3Q6STE5 483 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 ADCK1Q86TW2 530 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 ARHGAP24Q8N264 748 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 AKR7LQ8NHP1 331 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 POM121L2Q96KW2 1035 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 BPESC1Q9GZL8 116 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 ACTR3BQ9P1U1 418 aa22.69■■□□□ 1.22
CDKN2A-201ENST00000304494 C5orf49A4QMS7 147 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 GZMKP49863 264 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 MAD2L1BPQ15013 274 aaPredicted RBP22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 THSD4Q6ZMP0 1018 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 ZDHHC21Q8IVQ6 265 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 ICA1LQ8NDH6 482 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 OR1J1Q8NGS3 322 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 RASD2Q96D21 266 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 ZNF416Q9BWM5 594 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 SLCO1C1Q9NYB5 712 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 IL20RAQ9UHF4 553 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 TMCC3Q9ULS5 477 aa22.68■■□□□ 1.22
CDKN2A-201ENST00000304494 IGLV3-9A0A075B6K5 115 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 IGHV4-31P0DP07 118 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 CALB2P22676 271 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 RRM2P31350 389 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 ENDOGQ14249 297 aaKnown RBP22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 MOGQ16653 247 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 MTX3Q5HYI7 312 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 C1orf174Q8IYL3 243 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 WNT5BQ9H1J7 359 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 VSX1Q9NZR4 365 aaPredicted RBP22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 TAAR3PQ9P1P4 343 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 IER3IP1Q9Y5U9 82 aa22.67■■□□□ 1.22
CDKN2A-201ENST00000304494 ANK3Q12955 4377 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms