RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SIRPAP78324 504 aa5.13□□□□□ -1.59
CPSF2-201ENST00000298875 MEP1BQ16820 701 aa5.13□□□□□ -1.59
CPSF2-201ENST00000298875 PRAMEF20Q5VT98 475 aa5.13□□□□□ -1.59
CPSF2-201ENST00000298875 TREX1Q9NSU2 369 aa5.13□□□□□ -1.59
CPSF2-201ENST00000298875 MOKQ9UQ07 419 aa5.13□□□□□ -1.59
CPSF2-201ENST00000298875 CSAG2Q9Y5P2 127 aa5.13□□□□□ -1.59
CPSF2-201ENST00000298875 HPNP05981 417 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 RD3LP0DJH9 198 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 GLB1P16278 677 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SRMP19623 302 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 BLVRBP30043 206 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 HOXA11P31270 313 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 KIAA1024LP59773 190 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TMEM182Q6ZP80 229 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 FA2HQ7L5A8 372 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 NAXDQ8IW45 347 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 NKAIN3Q8N8D7 197 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 PLPP7Q8NBV4 271 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 OR8U1Q8NH10 309 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SLC38A5Q8WUX1 472 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 KIAA1324LA8MWY0 1029 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 HS3ST1O14792 307 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CNIH1O95406 144 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 NUBP1P53384 320 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TEX261Q6UWH6 196 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 MED25Q71SY5 747 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 LMNTD1Q8N9Z9 388 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 DTD2Q96FN9 168 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CALHM2Q9HA72 323 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CD207Q9UJ71 328 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 RALYQ9UKM9 306 aaKnown RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 U3KQ87 197 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 ZNF264O43296 627 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 C1orf220Q5T0J3 134 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 RELL2Q8NC24 303 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CCDC74AQ96AQ1 378 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 FAM3DQ96BQ1 224 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SMIM12Q96EX1 92 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 DCLRE1CQ96SD1 692 aaKnown RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 OR51I2Q9H344 312 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 USP22Q9UPT9 525 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 ANKUB1A6NFN9 424 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 C1SP09871 688 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SHC1P29353 583 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 HSF5Q4G112 596 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CLSTN3Q9BQT9 956 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 NOSIPQ9Y314 301 aaKnown RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 LOC100289279A0A1B0GTE1 492 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CRYM-AS1A6NIL9 109 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 LRRC30A6NM36 301 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 PAPLNO95428 1278 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CCR7P32248 378 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 PRLHRP49683 370 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 VEGFBP49765 207 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SNRPGP62308 76 aaKnown RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 RAC1P63000 192 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 JAG1P78504 1218 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TBC1D28Q2M2D7 210 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CLLU1OSQ5K130 101 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SYT9Q86SS6 491 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 PFN4Q8NHR9 129 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 EDAQ92838 391 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 MUCL1Q96DR8 90 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 WDR83Q9BRX9 315 aaKnown RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TEX101Q9BY14 249 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 A0A0A6YYJ9 748 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 BIDP55957 195 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 PLK5Q496M5 336 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 OPN5Q6U736 354 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CLEC14AQ86T13 490 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 COPS9Q8WXC6 57 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 RASD2Q96D21 266 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 ENTPD2Q9Y5L3 495 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 OR6C68A6NDL8 312 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 CST5P28325 142 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 PXNP49023 591 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 ELOBQ15370 118 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TMEM176BQ3YBM2 270 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 NXNL2Q5VZ03 156 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 KCTD11Q693B1 232 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 BTNL8Q6UX41 500 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 H2BFWTQ7Z2G1 175 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 ZFP62Q8NB50 900 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 OR10Z1Q8NGY1 313 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TWSG1Q9GZX9 223 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SMDT1Q9H4I9 107 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 HEYLQ9NQ87 328 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 OR52A1Q9UKL2 312 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 N4BP2Q86UW6 1770 aaPredicted RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TMEM210A6NLX4 147 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SPINT2O43291 252 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 SLC35A1P78382 337 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 ZNF154Q13106 437 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 ZNF343Q6P1L6 599 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 PARS2Q7L3T8 475 aaKnown RBP5.12□□□□□ -1.59
CPSF2-201ENST00000298875 ZNF595Q8IYB9 648 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 UBAC2Q8NBM4 344 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 OR2G3Q8NGZ4 309 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TMEM255BQ8WV15 326 aa5.12□□□□□ -1.59
CPSF2-201ENST00000298875 TOE1Q96GM8 510 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms