RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 POU1F1P28069 291 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 LOXP28300 417 aaPredicted RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 SLC6A6P31641 620 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 CDAP32320 146 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 GRK5P34947 590 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 UGT2B10P36537 528 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 RPL4P36578 427 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 CSNK1A1P48729 337 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 PCYT1AP49585 367 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 DAP3P51398 398 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 ALDH3A2P51648 485 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 CRISP1P54107 249 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ARF1P84077 181 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 EFNB1P98172 346 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ROR2Q01974 943 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.16□□□□□ -1.58
SSX3-201ENST00000298396 NPRL3Q12980 569 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 RIPK1Q13546 671 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 GINS1Q14691 196 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 PTGES3Q15185 160 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 TAF11Q15544 211 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 TRIP10Q15642 601 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 GABRA6Q16445 453 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 LRRC36Q1X8D7 754 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 CEACAM16Q2WEN9 425 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ZIK1Q3SY52 487 aaPredicted RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 SLX4IPQ5VYV7 408 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 OTPQ5XKR4 325 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 C12orf73Q69YU5 71 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 GPR139Q6DWJ6 353 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 FOXL2NBQ6ZUU3 175 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ZNF627Q7L945 461 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 BHLHA15Q7RTS1 189 aaPredicted RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 MYPOPQ86VE0 399 aaPredicted RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 KRTAP1-3Q8IUG1 177 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 POMGNT2Q8NAT1 580 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 CYB561A3Q8NBI2 242 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 SLC37A3Q8NCC5 494 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 SDR9C7Q8NEX9 313 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 BBS1Q8NFJ9 593 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 OR1K1Q8NGR3 316 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 OR4K13Q8NH42 304 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 FGFBP3Q8TAT2 258 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 CA5BP1Q8WTZ4 195 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 DNAJC9Q8WXX5 260 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 BCL2L2Q92843 193 aaPredicted RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 MCHR2Q969V1 340 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ZNF566Q969W8 418 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 S100PBPQ96BU1 408 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 BOD1Q96IK1 185 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ADAD1Q96M93 576 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 FOXN4Q96NZ1 517 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 NMNAT3Q96T66 252 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 RBM4BQ9BQ04 359 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 C9orf16Q9BUW7 83 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ALG12Q9BV10 488 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 RBM4Q9BWF3 364 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 TOR3AQ9H497 397 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 DCLRE1BQ9H816 532 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 MED20Q9H944 212 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 NOX3Q9HBY0 568 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 CRLF2Q9HC73 371 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 KCNJ16Q9NPI9 418 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 AP5S1Q9NUS5 200 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 PARPBPQ9NWS1 579 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 COQ3Q9NZJ6 369 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 NPAP1Q9NZP6 1156 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 KIF17Q9P2E2 1029 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 KLF2Q9Y5W3 355 aaPredicted RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 USF3Q68DE3 2245 aa5.15□□□□□ -1.58
SSX3-201ENST00000298396 CSMD2Q7Z408 3487 aa5.15□□□□□ -1.58
SSX3-201ENST00000298396 A0A1W2PR80 420 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 CCDC182A6NF36 153 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 A6NIZ1 184 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 FAM183AA6NL82 134 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 ZNF726A6NNF4 738 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 ZNF99A8MXY4 864 aaPredicted RBP5.15□□□□□ -1.59
SSX3-201ENST00000298396 CENPBD1B2RD01 187 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 ZNF587BE7ETH6 402 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 H3BN98 237 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 SURF4O15260 269 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 DHHO43323 396 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 AKAP8O43823 692 aaKnown RBP5.15□□□□□ -1.59
SSX3-201ENST00000298396 IDH3BO43837 385 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 PRKYO43930 277 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 RAD51DO75771 328 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 CNOT4O95628 575 aaKnown RBP5.15□□□□□ -1.59
SSX3-201ENST00000298396 GAAP10253 952 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 CLUP10909 449 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 B4GALT1P15291 398 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 SLC2A5P22732 501 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 MPGP29372 298 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 RPS6KA3P51812 740 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 CLRN1P58418 232 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 RAP1BP61224 184 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 ESRRGP62508 458 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 RAP1AP62834 184 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 TUBA1BP68363 451 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 TUBA4AP68366 448 aa5.15□□□□□ -1.59
SSX3-201ENST00000298396 SLC34A1Q06495 639 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms