RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 ZNF823P16415 610 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 EIF1AXP47813 144 aaKnown RBP17.24■□□□□ 0.35
BRAF-201ENST00000288602 CAMK2DQ13557 499 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 OR6S1Q8NH40 331 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 SYNPRQ8TBG9 265 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 ADAMTS14Q8WXS8 1223 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 CAMK2AQ9UQM7 478 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 TRAV6A0A075B6T7 132 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 IGLV3-32A0A0A0MS00 114 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 A6NIZ1 184 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 CCL3P10147 92 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 DLX5P56178 289 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 RAP1BP61224 184 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 RAP1AP62834 184 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 TMEM176BQ3YBM2 270 aaPredicted RBP17.24■□□□□ 0.35
BRAF-201ENST00000288602 SLC25A53Q5H9E4 307 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 TEX30Q5JUR7 227 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 C3orf33Q6P1S2 294 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 KCTD18Q6PI47 426 aaPredicted RBP17.24■□□□□ 0.35
BRAF-201ENST00000288602 NDUFAF7Q7L592 441 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 OR11G2Q8NGC1 345 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 OR52N5Q8NH56 324 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 GNRHR2Q96P88 292 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 CMKLR1Q99788 373 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 POTEKPQ9BYX7 375 aa17.24■□□□□ 0.35
BRAF-201ENST00000288602 TRBV5-7A0A0A0MS05 114 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 INMT-MINDY4F8WBC2 141 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 GPR171O14626 319 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 RIDAP52758 137 aaKnown RBP17.23■□□□□ 0.35
BRAF-201ENST00000288602 BLVRAP53004 296 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 ROM1Q03395 351 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 CARD17Q5XLA6 110 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 DTWD2Q8NBA8 298 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 JSRP1Q96MG2 331 aaPredicted RBP17.23■□□□□ 0.35
BRAF-201ENST00000288602 ZNF700Q9H0M5 742 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 B3GALT5Q9Y2C3 310 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 EMC9Q9Y3B6 208 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 PTGS2P35354 604 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 PITPNAQ00169 270 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 PLA1AQ53H76 456 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 ASPHD2Q6ICH7 369 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 LRFN4Q6PJG9 635 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 DND1Q8IYX4 353 aaKnown RBP17.23■□□□□ 0.35
BRAF-201ENST00000288602 OR2Y1Q8NGV0 311 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 CAPSLQ8WWF8 208 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 KCNK15Q9H427 330 aa17.23■□□□□ 0.35
BRAF-201ENST00000288602 LOC101059948A0A1B0GTJ6 334 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 CCR6P51684 374 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 GLB1L2Q8IW92 636 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 MCHR2Q969V1 340 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 CENPMQ9NSP4 180 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 PHF3Q92576 2039 aaKnown RBP17.22■□□□□ 0.35
BRAF-201ENST00000288602 TP53I11O14683 189 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 MT-ND4P03905 459 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 MPLP40238 635 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 SF3B4Q15427 424 aaKnown RBP eCLIP17.22■□□□□ 0.354e-6■■□□□ 12.7
BRAF-201ENST00000288602 ZFP69Q49AA0 526 aa17.22■□□□□ 0.35
BRAF-201ENST00000288602 ZNF468Q5VIY5 522 aaPredicted RBP17.22■□□□□ 0.35
BRAF-201ENST00000288602 ZNF486Q96H40 463 aaPredicted RBP17.22■□□□□ 0.35
BRAF-201ENST00000288602 ARSBP15848 533 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 GIFP27352 417 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 P2RY4P51582 365 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 CLPPQ16740 277 aaPredicted RBP17.21■□□□□ 0.35
BRAF-201ENST00000288602 C6orf183Q5T699 404 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 TMEM225Q6GV28 225 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 FDX2Q6P4F2 183 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 CATSPERDQ86XM0 798 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 UEVLDQ8IX04 471 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 FADS6Q8N9I5 356 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 ST7LQ8TDW4 575 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 PTGES2Q9H7Z7 377 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 NUDT15Q9NV35 164 aa17.21■□□□□ 0.35
BRAF-201ENST00000288602 NSG1A0A0A6YYJ2 146 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 CENPBD1B2RD01 187 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 ORC5O43913 435 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 ZNF432O94892 652 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 CDK2P24941 298 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 FOLR3P41439 243 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 MFAP5Q13361 173 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 BCL2L15Q5TBC7 163 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 NHLRC1Q6VVB1 395 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 PLPP7Q8NBV4 271 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 KLK11Q9UBX7 282 aa17.21■□□□□ 0.34
BRAF-201ENST00000288602 KHDRBS3O75525 346 aaKnown RBP17.2■□□□□ 0.34
BRAF-201ENST00000288602 STK17BO94768 372 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 RAF1P04049 648 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 HLA-DMAP28067 261 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 CDAP32320 146 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 GDNFP39905 211 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 EXT1Q16394 746 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 DNM1P34Q6PK57 102 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 PLCZ1Q86YW0 608 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 OR52I2Q8NH67 350 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 SMIM4Q8WVI0 70 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 C11orf40Q8WZ69 217 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 S100A16Q96FQ6 103 aaKnown RBP17.2■□□□□ 0.34
BRAF-201ENST00000288602 PROK2Q9HC23 129 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 FOXJ3Q9UPW0 622 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 BOLA1Q9Y3E2 137 aa17.2■□□□□ 0.34
BRAF-201ENST00000288602 A0A1W2PPL8 197 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms