RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PPP1R32Q7Z5V6 425 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 YRDCQ86U90 279 aaKnown RBP16.03■□□□□ 0.16
CAPN1-201ENST00000279247 ESX1Q8N693 406 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 OR1J4Q8NGS1 313 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 KCTD12Q96CX2 325 aaKnown RBP16.03■□□□□ 0.16
CAPN1-201ENST00000279247 C4orf45Q96LM5 186 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 DMRTB1Q96MA1 342 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 PRKAR1AP10644 381 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 RFC3P40938 356 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 RIDAP52758 137 aaKnown RBP16.03■□□□□ 0.16
CAPN1-201ENST00000279247 RFT1Q96AA3 541 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 KIAA1143Q96AT1 154 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-201ENST00000279247 DCBLD2Q96PD2 775 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 KCNK17Q96T54 332 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 SLITRK2Q9H156 845 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 B3GALT5Q9Y2C3 310 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 LOC101059948A0A1B0GTJ6 334 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 MEIOCA2RUB1 952 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 A6NIZ1 184 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 IFITM5A6NNB3 132 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 SEC14L5O43304 696 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 ZNF43P17038 809 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 RAP1BP61224 184 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 RAP1AP62834 184 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 KCTD18Q6PI47 426 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-201ENST00000279247 SCAIQ8N9R8 606 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 TEX19Q8NA77 164 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 SLC26A10Q8NG04 563 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 OR10H5Q8NGA6 315 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 GPR148Q8TDV2 347 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 RBP7Q96R05 134 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 CEP250Q9BV73 2442 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 GVINP1Q7Z2Y8 2422 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 A0A1W2PNU3 283 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-201ENST00000279247 UNQ9370/PRO34162Q6UXP9 181 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 LINGO2Q7L985 606 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-201ENST00000279247 NAXDQ8IW45 347 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 CMTM4Q8IZR5 234 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 UCN2Q96RP3 112 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 ABCG5Q9H222 651 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 AUNIPQ9H7T9 357 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 PARD6AQ9NPB6 346 aa16.02■□□□□ 0.16
CAPN1-201ENST00000279247 MYEF2Q9P2K5 600 aaKnown RBP16.02■□□□□ 0.16
CAPN1-201ENST00000279247 FARSAQ9Y285 508 aaKnown RBP16.02■□□□□ 0.16
CAPN1-201ENST00000279247 C9orf172C9J069 976 aa16.02■□□□□ 0.15
CAPN1-201ENST00000279247 PLA2G7Q13093 441 aa16.02■□□□□ 0.15
CAPN1-201ENST00000279247 CLPPQ16740 277 aaPredicted RBP16.02■□□□□ 0.15
CAPN1-201ENST00000279247 AGAP6Q5VW22 663 aa16.02■□□□□ 0.15
CAPN1-201ENST00000279247 METAP1DQ6UB28 335 aaPredicted RBP16.02■□□□□ 0.15
CAPN1-201ENST00000279247 OR52N5Q8NH56 324 aa16.02■□□□□ 0.15
CAPN1-201ENST00000279247 C11orf40Q8WZ69 217 aa16.02■□□□□ 0.15
CAPN1-201ENST00000279247 AGAP4Q96P64 663 aa16.02■□□□□ 0.15
CAPN1-201ENST00000279247 POTEKPQ9BYX7 375 aa16.02■□□□□ 0.15
CAPN1-201ENST00000279247 RBMX2Q9Y388 322 aaKnown RBP16.02■□□□□ 0.15
CAPN1-201ENST00000279247 ZNF407Q9C0G0 2248 aa16.02■□□□□ 0.15
CAPN1-201ENST00000279247 TRAPPC6AO75865 159 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 PLPP7Q8NBV4 271 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 M1APQ8TC57 530 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 PROK2Q9HC23 129 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 P4HTMQ9NXG6 502 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 OR2M5A3KFT3 312 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 TMEM212A6NML5 194 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 B4E171 279 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 SLC2A1P11166 492 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 RBMS1P29558 406 aaKnown RBP16.01■□□□□ 0.15
CAPN1-201ENST00000279247 TSPAN7P41732 249 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 CLDN17P56750 224 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 DNM1P34Q6PK57 102 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 SUMF1Q8NBK3 374 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 RNF138Q8WVD3 245 aa16.01■□□□□ 0.15
CAPN1-201ENST00000279247 KHDRBS3O75525 346 aaKnown RBP16■□□□□ 0.15
CAPN1-201ENST00000279247 NR4A2P43354 598 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 RPS15P62841 145 aaKnown RBP16■□□□□ 0.15
CAPN1-201ENST00000279247 MZT2BQ6NZ67 158 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 DDX28Q9NUL7 540 aaKnown RBP16■□□□□ 0.15
CAPN1-201ENST00000279247 NUFIP1Q9UHK0 495 aaKnown RBP16■□□□□ 0.15
CAPN1-201ENST00000279247 NCOA6Q14686 2063 aaPredicted RBP16■□□□□ 0.15
CAPN1-201ENST00000279247 PDCD5O14737 125 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 PHYHO14832 338 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 LMX1BO60663 402 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 IGHMP01871 453 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 TMIGD3P0DMS9 266 aaPredicted RBP16■□□□□ 0.15
CAPN1-201ENST00000279247 MLF1P58340 268 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 RASGEF1BQ0VAM2 473 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 GLB1L2Q8IW92 636 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 RNF121Q9H920 327 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 ABRACLQ9P1F3 81 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 SPATA2Q9UM82 520 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 TRAV6A0A075B6T7 132 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 A0A0B4J293 547 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 TMEM269A0A1B0GVZ9 245 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 AIPO00170 330 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 H2BFMP0C1H6 154 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 PRKXP51817 358 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 ZP4Q12836 540 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 GFOD2Q3B7J2 385 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 FADS6Q8N9I5 356 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 SYNPRQ8TBG9 265 aa16■□□□□ 0.15
CAPN1-201ENST00000279247 RNF128Q8TEB7 428 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms