RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 IDO1P14902 403 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 GATA1P15976 413 aaPredicted RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 HLA-GP17693 338 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 XRCC1P18887 633 aaPredicted RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 IDSP22304 550 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 IFNA8P32881 189 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 NSG1P42857 185 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SLC1A1P43005 524 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 CSNK1A1P48729 337 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 PRLHRP49683 370 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 NKX2-5P52952 324 aaPredicted RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 RAB4BP61018 213 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 RPS15AP62244 130 aaKnown RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 SLC7A9P82251 487 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 FKBP3Q00688 224 aaKnown RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 ZNF33AQ06730 810 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SRSF1Q07955 248 aaKnown RBP eCLIP3.94□□□□□ -1.78
CD44-202ENST00000278385 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 TRAF2Q12933 501 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 MTF1Q14872 753 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 TMED2Q15363 201 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 CTF1Q16619 201 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 ISXQ2M1V0 245 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 RPEL1Q2QD12 228 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 YIF1BQ5BJH7 314 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 DMRTC1Q5HYR2 192 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SOHLH1Q5JUK2 328 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SLC35D3Q5M8T2 416 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 BEND6Q5SZJ8 279 aaPredicted RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 IDNKQ5T6J7 187 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 C1orf189Q5VU69 101 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 TCEAL6Q6IPX3 200 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SPOPLQ6IQ16 392 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 ACSM5Q6NUN0 579 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 CERS6Q6ZMG9 384 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 RFPL4BQ6ZWI9 263 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 FAM57BQ71RH2 274 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 TIPARPQ7Z3E1 657 aaKnown RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 SLC35F2Q8IXU6 374 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 C10orf67Q8IYJ2 551 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 CYP4Z2PQ8N1L4 340 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 DHRSXQ8N5I4 330 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 RELL2Q8NC24 303 aaPredicted RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 NOXO1Q8NFA2 376 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 OR10V1Q8NGI7 309 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 TMEM163Q8TC26 289 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 WFIKKN2Q8TEU8 576 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 PNPLA2Q96AD5 504 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 RPEQ96AT9 228 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SMARCD1Q96GM5 515 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 ZNF75AQ96N20 296 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 ATP5SQ99766 215 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 NIPSNAP3BQ9BS92 247 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 KRTAP17-1Q9BYP8 105 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 LAT2Q9GZY6 243 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 EBF3Q9H4W6 596 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 PLEKHA1Q9HB21 404 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 C19orf12Q9NSK7 152 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 DUS2Q9NX74 493 aaKnown RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 EIF3KQ9UBQ5 218 aaKnown RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 SPATA2Q9UM82 520 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 ICAM5Q9UMF0 924 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 STUB1Q9UNE7 303 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SLC17A4Q9Y2C5 497 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 WIF1Q9Y5W5 379 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 ALG6Q9Y672 507 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 MRPS18BQ9Y676 258 aaKnown RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 SAR1BQ9Y6B6 198 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 R4GN57 208 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 CUL9Q8IWT3 2517 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 PCSK5Q92824 1860 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 TRANK1O15050 2925 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 FAM92AA1XBS5 289 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 FUOMA2VDF0 154 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 OR5K3A6NET4 321 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 SOCS2O14508 198 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 NDUFS7O75251 213 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 KHDRBS3O75525 346 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 ATP5LO75964 103 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 TNFAIP8O95379 198 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 IFNA5P01569 189 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 IGHG4P01861 327 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 SP1P08047 785 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 RPS17P08708 135 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 ZDHHC11BP0C7U3 371 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 PRSS56P0CW18 603 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 COX5BP10606 129 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 H2AFXP16104 143 aaPredicted RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 CBR1P16152 277 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 ZP3P21754 424 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 CBLP22681 906 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 LHCGRP22888 699 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 DTYMKP23919 212 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 CXCR2P25025 360 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 GCAP28676 217 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 GCLMP48507 274 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 TMED10P49755 219 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 MLLT10P55197 1068 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 RAG2P55895 527 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 SEC61BP60468 96 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms