RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 EGLN1Q9GZT9 426 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CHRNA9Q9UGM1 479 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 TOPAZ1Q8N9V7 1692 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 LOC100289279A0A1B0GTE1 492 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 SIX6O95475 246 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 PIGAP37287 484 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 ELLP55199 621 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 KCNJ8Q15842 424 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 NRARPQ7Z6K4 114 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 WDR5BQ86VZ2 330 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 OR10J5Q8NHC4 309 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 HES7Q9BYE0 225 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 DAPP1Q9UN19 280 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 NAGAP17050 411 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 CR2P20023 1033 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-201ENST00000275233 CSF3RQ99062 836 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 CORINQ9Y5Q5 1042 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 FAM221AA4D161 298 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 MAGEB4O15481 346 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-201ENST00000275233 TGM1P22735 817 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 SLC35A2P78381 396 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 TIMD4Q96H15 378 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 MKRN2Q9H000 416 aaKnown RBP10.87□□□□□ -0.67
SHPRH-201ENST00000275233 UBQLN3Q9H347 655 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 PLK3Q9H4B4 646 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 ZNF346Q9UL40 294 aaKnown RBP10.87□□□□□ -0.67
SHPRH-201ENST00000275233 FITM1A5D6W6 292 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 CLDN24A6NM45 220 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 IL2RAP01589 272 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 HNF1AP20823 631 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 APOBEC1P41238 236 aaKnown RBP10.87□□□□□ -0.67
SHPRH-201ENST00000275233 NDUFA6P56556 154 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 AFMIDQ63HM1 303 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 TMEM104Q8NE00 496 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 CHST11Q9NPF2 352 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 TMEM9BQ9NQ34 198 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 BTBD17A6NE02 478 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 GPR171O14626 319 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 PAPLNO95428 1278 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 APEX1P27695 318 aaKnown RBP10.87□□□□□ -0.67
SHPRH-201ENST00000275233 SLC19A1P41440 591 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 USP51Q70EK9 711 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 GATA6Q92908 595 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 PROCRQ9UNN8 238 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 C4AP0C0L4 1744 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 CPT2P23786 658 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 CCR2P41597 374 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 THBS3P49746 956 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 MNX1P50219 401 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-201ENST00000275233 CLVS2Q5SYC1 327 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 RTL8AQ9BWD3 113 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 OSGIN2Q9Y236 505 aa10.87□□□□□ -0.67
SHPRH-201ENST00000275233 HMGN4O00479 90 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 ANKRD33Q7Z3H0 272 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 ROBO4Q8WZ75 1007 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 STACQ99469 402 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 ARPC5LQ9BPX5 153 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 CTSFQ9UBX1 484 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 OLFM2O95897 454 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 SCGB1D1O95968 90 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 SRFP11831 508 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 HLA-DOBP13765 273 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 S100A7P31151 101 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 RPS27P42677 84 aaKnown RBP10.86□□□□□ -0.67
SHPRH-201ENST00000275233 Q6ZS52 159 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 EGFL6Q8IUX8 553 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 TIAM2Q8IVF5 1701 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 SLC43A2Q8N370 569 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 ZNF439Q8NDP4 499 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 OR1S2Q8NGQ3 325 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 OR2M2Q96R28 347 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 OR6C65A6NJZ3 312 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 CSF3P09919 207 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 FPR3P25089 353 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 MRPL19P49406 292 aaKnown RBP10.86□□□□□ -0.67
SHPRH-201ENST00000275233 EMDP50402 254 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 HBG1P69891 147 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 HBG2P69892 147 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 H2BFWTQ7Z2G1 175 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 OR51A4Q8NGJ6 313 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 OR51A2Q8NGJ7 313 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 CMTM2Q8TAZ6 248 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 SDF2Q99470 211 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 NARFLQ9H6Q4 476 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 SMCO4Q9NRQ5 59 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 HIST1H1CP16403 213 aaKnown RBP10.86□□□□□ -0.67
SHPRH-201ENST00000275233 GALEQ14376 348 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 ADGRE4PQ86SQ3 457 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 CATSPERDQ86XM0 798 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 COL16A1Q07092 1604 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-201ENST00000275233 FER1L6Q2WGJ9 1857 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 CTSLP07711 333 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 RELAQ04206 551 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 C2orf76Q3KRA6 126 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 ZNF385BQ569K4 471 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 OR51F2Q8NH61 342 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 SLCO4A1Q96BD0 722 aa10.86□□□□□ -0.67
SHPRH-201ENST00000275233 PINX1Q96BK5 328 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms