RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 PITPNBP48739 271 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 NANOS3P60323 173 aaKnown RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 RRAS2P62070 204 aaPredicted RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 TNK1Q13470 666 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ETFDHQ16134 617 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 FAM27D1Q5T7N8 215 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF468Q5VIY5 522 aaPredicted RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 THOC7Q6I9Y2 204 aaKnown RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 TMPPEQ6ZT21 453 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 OR4M2Q8NGB6 313 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 NSMAFQ92636 917 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 MIB2Q96AX9 1013 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 JSRP1Q96MG2 331 aaPredicted RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 PIGQQ9BRB3 760 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 WACQ9BTA9 647 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 HDHD2Q9H0R4 259 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 MRPL22Q9NWU5 206 aaKnown RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 MED29Q9NX70 200 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 B3GAT1Q9P2W7 334 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 TEKT2Q9UIF3 430 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 KCNG2Q9UJ96 466 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 DKKL1Q9UK85 242 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 LOC102725191A0A1B0GVB3 256 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 A0A1W2PNR3 127 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 STMND1H3BQB6 276 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 TERTO14746 1132 aaKnown RBP13.69□□□□□ -0.22
SF3B4-201ENST00000271628 RAD1O60671 282 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 KHDRBS3O75525 346 aaKnown RBP13.69□□□□□ -0.22
SF3B4-201ENST00000271628 TNFSF15O95150 251 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 ZFPL1O95159 310 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF823P16415 610 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 THBS2P35442 1172 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 CYB561P49447 251 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 BIDP55957 195 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 FOXK1P85037 733 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 SFXN4Q6P4A7 337 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 MDGA2Q7Z553 956 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 PIP4P1Q86T03 277 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF679Q8IYX0 411 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 OR13C5Q8NGS8 318 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 OR5AK2Q8NH90 309 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 RFT1Q96AA3 541 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 OXGR1Q96P68 337 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 IP6K3Q96PC2 410 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 OR8B4Q96RC9 309 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 SLX1AQ9BQ83 275 aa13.69□□□□□ -0.22
SF3B4-201ENST00000271628 THAP7Q9BT49 309 aaPredicted RBP13.69□□□□□ -0.22
SF3B4-201ENST00000271628 ARPC4-TTLL3A0A0A6YYG9 625 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 A6NL46 340 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 ZIC3O60481 467 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 EIF1BO60739 113 aaKnown RBP13.68□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF432O94892 652 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 MAPK3P27361 379 aaPredicted RBP13.68□□□□□ -0.22
SF3B4-201ENST00000271628 PTGS2P35354 604 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 P2RY4P51582 365 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 ROM1Q03395 351 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 RASGEF1BQ0VAM2 473 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 HSD17B12Q53GQ0 312 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 THEM4Q5T1C6 240 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 RAET1LQ5VY80 246 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 B3GNTL1Q67FW5 361 aaPredicted RBP13.68□□□□□ -0.22
SF3B4-201ENST00000271628 NHLRC1Q6VVB1 395 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 GLCCI1Q86VQ1 547 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 RNF166Q96A37 237 aaPredicted RBP13.68□□□□□ -0.22
SF3B4-201ENST00000271628 OR14A2Q96R54 314 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 COMMD4Q9H0A8 199 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 FRRS1LQ9P0K9 344 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 KLHL9Q9P2J3 617 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 RASD1Q9Y272 281 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 AQP7P3A6NL99 342 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 TMEM212A6NML5 194 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 AQP8O94778 261 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 OPN1LWP04000 364 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 HRGP04196 525 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 SPARCP09486 303 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF24P17028 368 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF43P17038 809 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 RPS27P42677 84 aaKnown RBP13.68□□□□□ -0.22
SF3B4-201ENST00000271628 C19orf57Q0VDD7 668 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 MAB21L1Q13394 359 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 MEP1BQ16820 701 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 TEX30Q5JUR7 227 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 C1QTNF12Q5T7M4 302 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 PYHIN1Q6K0P9 492 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 SAMD12Q8N8I0 201 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 OR4M1Q8NGD0 313 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
SF3B4-201ENST00000271628 THOC3Q96J01 351 aaKnown RBP13.68□□□□□ -0.22
SF3B4-201ENST00000271628 MAP6Q96JE9 813 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 MRPL13Q9BYD1 178 aaKnown RBP13.68□□□□□ -0.22
SF3B4-201ENST00000271628 STMN3Q9NZ72 180 aa13.68□□□□□ -0.22
SF3B4-201ENST00000271628 OR2M5A3KFT3 312 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 GJE1A6NN92 205 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 NOTOA8MTQ0 251 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 PRR33A8MZF0 331 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 TMEM127O75204 238 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 ALX3O95076 343 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 IGHG1P01857 330 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 SRMP19623 302 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms