RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 GABRR3A8MPY1 467 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 LDB3O75112 727 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 ERHP84090 104 aaKnown RBP11.18□□□□□ -0.62
SRRM4-201ENST00000267260 ETFDHQ16134 617 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 TOMM20LQ6UXN7 152 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 TFAP2EQ6VUC0 442 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 SLC35B4Q969S0 331 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 FAM24AA6NFZ4 105 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 SDC1P18827 310 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 TRIM61Q5EBN2 209 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 FRMPD2BQ6IN97 320 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 ZNF485Q8NCK3 441 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 HRASLS5Q96KN8 279 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 GSX1Q9H4S2 264 aaPredicted RBP11.18□□□□□ -0.62
SRRM4-201ENST00000267260 NXPH3O95157 252 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 CYC1P08574 325 aa11.18□□□□□ -0.62
SRRM4-201ENST00000267260 HIST1H1TP22492 207 aaPredicted RBP11.18□□□□□ -0.62
SRRM4-201ENST00000267260 SYT6Q5T7P8 510 aaPredicted RBP11.18□□□□□ -0.62
SRRM4-201ENST00000267260 DVL3Q92997 716 aaPredicted RBP11.18□□□□□ -0.62
SRRM4-201ENST00000267260 ZXDBP98169 803 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 MS4A2Q01362 244 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 ABHD4Q8TB40 342 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 MBOAT4Q96T53 435 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 NOSIPQ9Y314 301 aaKnown RBP11.17□□□□□ -0.62
SRRM4-201ENST00000267260 CD80P33681 288 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 LTC4SQ16873 150 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 LYSMD2Q8IV50 215 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 NAXDQ8IW45 347 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 ZNF320A2RRD8 509 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 FAM183AA6NL82 134 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 HMGN2P05204 90 aaKnown RBP11.17□□□□□ -0.62
SRRM4-201ENST00000267260 TM4SF1P30408 202 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 UBAC2Q8NBM4 344 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 GJC3Q8NFK1 279 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 NRG4Q8WWG1 115 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 EMG1Q92979 244 aaKnown RBP11.17□□□□□ -0.62
SRRM4-201ENST00000267260 TMEM106AQ96A25 262 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 ZNF845Q96IR2 970 aaPredicted RBP11.17□□□□□ -0.62
SRRM4-201ENST00000267260 SYT17Q9BSW7 474 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 ST8SIA3O43173 380 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 HOXD13P35453 343 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 ALKBH1Q13686 389 aaKnown RBP11.17□□□□□ -0.62
SRRM4-201ENST00000267260 RUNX3Q13761 415 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 ASB11Q8WXH4 323 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 SLC7A6Q92536 515 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 CSF3P09919 207 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 PSMB2P49721 201 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 CDCA3Q99618 268 aaPredicted RBP11.17□□□□□ -0.62
SRRM4-201ENST00000267260 FAM166BA8MTA8 275 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 HSBP1O75506 76 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 GJB5O95377 273 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 CHRM2P08172 466 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 CD1EP15812 388 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 NKX2-1P43699 371 aaPredicted RBP11.17□□□□□ -0.62
SRRM4-201ENST00000267260 OR1D4P47884 311 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 HES1Q14469 280 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 FAM3CQ92520 227 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 ATXN1LP0C7T5 689 aaKnown RBP11.17□□□□□ -0.62
SRRM4-201ENST00000267260 PHLDA2Q53GA4 152 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 Q6ZSR6 202 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 OR5AR1Q8NGP9 310 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 SLC25A46Q96AG3 418 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 FAAP24Q9BTP7 215 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 MYOFQ9NZM1 2061 aa11.17□□□□□ -0.62
SRRM4-201ENST00000267260 TRDV1A0A1B0GX56 115 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 SH2D7A6NKC9 451 aaPredicted RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 PLRG1O43660 514 aaKnown RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 CCR9P51686 369 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 UBE3DQ7Z6J8 389 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 CIB3Q96Q77 187 aaPredicted RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 WWTR1Q9GZV5 400 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 PI4KAP42356 2102 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 SSSCA1O60232 199 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 CNMDO75829 334 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 ATP1B1P05026 303 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 FBP1P09467 338 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 CALCBP10092 127 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 SSR4P51571 173 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 EPHA5P54756 1037 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 ADPRMQ3LIE5 342 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 VHLLQ6RSH7 139 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 ZFP62Q8NB50 900 aaPredicted RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 ELF4Q99607 663 aaPredicted RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 WDR83Q9BRX9 315 aaKnown RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 CA14Q9ULX7 337 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 CORINQ9Y5Q5 1042 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 TRAPPC1Q9Y5R8 145 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 RPS25P62851 125 aaKnown RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 SLC10A2Q12908 348 aaPredicted RBP11.16□□□□□ -0.62
SRRM4-201ENST00000267260 SLC5A12Q1EHB4 618 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 FFAR4Q5NUL3 377 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 OR6M1Q8NGM8 313 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 GPR62Q9BZJ7 368 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 TRABD2BA6NFA1 517 aa11.16□□□□□ -0.62
SRRM4-201ENST00000267260 GCAP28676 217 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms