RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CALCBP10092 127 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 CXCR1P25024 350 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 ARRB1P49407 418 aaPredicted RBP15.15■□□□□ 0.02
SQLE-201ENST00000265896 EIF2B5Q13144 721 aaKnown RBP15.15■□□□□ 0.02
SQLE-201ENST00000265896 SKP2Q13309 424 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 C3orf33Q6P1S2 294 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 TMEM88Q6PEY1 159 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 RTL10Q7L3V2 364 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 SPICQ8N5J4 248 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 STEAP2Q8NFT2 490 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 OR2A7Q96R45 310 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 PIAS3Q9Y6X2 628 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 DENND4AQ7Z401 1863 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 IGHV5-51A0A0C4DH38 117 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 FAM74A7A6NL05 159 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 RENP00797 406 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 VAMP1P23763 118 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 SKP1P63208 163 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 FAM74A3Q4VXF1 159 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 SLC35D3Q5M8T2 416 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 GABRG1Q8N1C3 465 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 BEST3Q8N1M1 668 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 ZNF615Q8N8J6 731 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 EXD3Q8N9H8 876 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 LRRC75AQ8NAA5 344 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 SLC25A44Q96H78 314 aaPredicted RBP15.14■□□□□ 0.01
SQLE-201ENST00000265896 NUDT22Q9BRQ3 303 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 APMAPQ9HDC9 416 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 MED11Q9P086 117 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 EEF1E1-BLOC1S5C9J1V9 151 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 SEMA4FO95754 770 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 OR4E1P0C645 316 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 OR7A5Q15622 319 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 ANKRD16Q6P6B7 361 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 SLC51BQ86UW2 128 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 ZSCAN1Q8NBB4 408 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 OR10K1Q8NGX5 313 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 NUDCD2Q8WVJ2 157 aa15.14■□□□□ 0.01
SQLE-201ENST00000265896 MRPL48Q96GC5 212 aaKnown RBP15.14■□□□□ 0.01
SQLE-201ENST00000265896 ZNF471Q9BX82 626 aaPredicted RBP15.14■□□□□ 0.01
SQLE-201ENST00000265896 DUSP15Q9H1R2 295 aaPredicted RBP15.14■□□□□ 0.01
SQLE-201ENST00000265896 COA3Q9Y2R0 106 aaPredicted RBP15.14■□□□□ 0.01
SQLE-201ENST00000265896 F12P00748 615 aaPredicted RBP15.13■□□□□ 0.01
SQLE-201ENST00000265896 ASAH2BP0C7U1 165 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 AKAIN1P0CW23 69 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 AKT2P31751 481 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 UBE2IP63279 158 aaKnown RBP15.13■□□□□ 0.01
SQLE-201ENST00000265896 EIF2B1Q14232 305 aaKnown RBP15.13■□□□□ 0.01
SQLE-201ENST00000265896 EMC6Q9BV81 110 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 UBQLN4Q9NRR5 601 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 MRPL22Q9NWU5 206 aaKnown RBP15.13■□□□□ 0.01
SQLE-201ENST00000265896 DHDHQ9UQ10 334 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 MRPS33Q9Y291 106 aaKnown RBP15.13■□□□□ 0.01
SQLE-201ENST00000265896 SESN1Q9Y6P5 492 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 TRAV14DV4A0A0A6YYC5 116 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 TRBV5-5A0A0J9YX44 114 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 TMEM82A0PJX8 343 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 C5orf67F2Z3F1 127 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 CPN1P15169 458 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 PI3P19957 117 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 ZP3P21754 424 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 MAPK3P27361 379 aaPredicted RBP15.13■□□□□ 0.01
SQLE-201ENST00000265896 FAUP35544 74 aaKnown RBP15.13■□□□□ 0.01
SQLE-201ENST00000265896 EFNA3P52797 238 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 GFOD2Q3B7J2 385 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 PDZD9Q8IXQ8 264 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 SDR16C5Q8N3Y7 309 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 SCARB1Q8WTV0 552 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 RADILQ96JH8 1075 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 DCBLD2Q96PD2 775 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 EVA1AQ9H8M9 152 aa15.13■□□□□ 0.01
SQLE-201ENST00000265896 PHF3Q92576 2039 aaKnown RBP15.13■□□□□ 0.01
SQLE-201ENST00000265896 C13orf42A0A1B0GVH6 325 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 HLA-AP01891 365 aaKnown RBP15.12■□□□□ 0.01
SQLE-201ENST00000265896 SLC2A1P11166 492 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 AKR1C4P17516 323 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 GABRG2P18507 467 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 GNALP38405 381 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 INSM1Q01101 510 aaPredicted RBP15.12■□□□□ 0.01
SQLE-201ENST00000265896 CDNFQ49AH0 187 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 ZNF417Q8TAU3 575 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 PTPMT1Q8WUK0 201 aaPredicted RBP15.12■□□□□ 0.01
SQLE-201ENST00000265896 TOE1Q96GM8 510 aaKnown RBP15.12■□□□□ 0.01
SQLE-201ENST00000265896 TAS2R3Q9NYW6 316 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 MSRAQ9UJ68 235 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 P2RY10O00398 339 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 CD1CP29017 333 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 CAPZA1P52907 286 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 RSPO4Q2I0M5 234 aaPredicted RBP15.12■□□□□ 0.01
SQLE-201ENST00000265896 SEH1LQ96EE3 360 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 LCORQ96JN0 433 aaPredicted RBP15.12■□□□□ 0.01
SQLE-201ENST00000265896 SLC6A7Q99884 636 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 GABRG3Q99928 467 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 MED29Q9NX70 200 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 METTL12A8MUP2 240 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 ZNF749O43361 778 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 ZNF254O75437 659 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 SLC25A12O75746 678 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 ATP1B3P54709 279 aa15.12■□□□□ 0.01
SQLE-201ENST00000265896 LY6G6FQ5SQ64 297 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms