RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ETFDHQ16134 617 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 TMEM225Q6GV28 225 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 KCTD18Q6PI47 426 aaPredicted RBP9.98□□□□□ -0.81
MSH3-201ENST00000265081 ICMTO60725 284 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 NDUFB6O95139 128 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 PSMB1P20618 241 aaKnown RBP9.98□□□□□ -0.81
MSH3-201ENST00000265081 ACHEP22303 614 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 SNTA1Q13424 505 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 CAMK2DQ13557 499 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 LYSMD4Q5XG99 296 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 GLDNQ6ZMI3 551 aaPredicted RBP9.98□□□□□ -0.81
MSH3-201ENST00000265081 OR5L2Q8NGL0 311 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 CCDC74BQ96LY2 380 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 OR6C1Q96RD1 312 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 FAM206AQ9NX38 181 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 SUSD2Q9UGT4 822 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 A0A0A6YYH2 397 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 GGT3PA6NGU5 568 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 A6NJ64 397 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 H0YC42 278 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 SULT1C2O00338 296 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 SCRG1O75711 98 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 CXCL3P19876 107 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 ADH6P28332 368 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 MMP16P51512 607 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 KRT74Q7RTS7 529 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 THEM6Q8WUY1 208 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 ARL5BQ96KC2 179 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 DLL4Q9NR61 685 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 MYOTQ9UBF9 498 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 FBLN5Q9UBX5 448 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 ELF5Q9UKW6 265 aaPredicted RBP9.98□□□□□ -0.81
MSH3-201ENST00000265081 WIF1Q9Y5W5 379 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 IGKV1D-43A0A0B4J1Z2 117 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 IGHV3-20A0A0C4DH32 117 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 C11orf98E9PRG8 122 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 TMIGD3P0DMS9 266 aaPredicted RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 MRPS15P82914 257 aaKnown RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 FOXF1Q12946 379 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ANGPT1Q15389 498 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 TMEM69Q5SWH9 247 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ARSKQ6UWY0 536 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ZNF767PQ75MW2 155 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 SLC36A1Q7Z2H8 476 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 GLB1L2Q8IW92 636 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 IZUMO1Q8IYV9 350 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 OR2M3Q8NG83 312 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 RADILQ96JH8 1075 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ZFP3Q96NJ6 502 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 NUDT16L1Q9BRJ7 211 aaKnown RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 MED28Q9H204 178 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 CYB5R1Q9UHQ9 305 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ATXN7L1Q9ULK2 861 aaPredicted RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 RCE1Q9Y256 329 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 SPAG17Q6Q759 2223 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 LOC100289279A0A1B0GTE1 492 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 SNRPGP15A8MWD9 76 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 FABP7O15540 132 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 SIGLEC6O43699 453 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ALX3O95076 343 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 MPZP25189 248 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 FKBP2P26885 142 aaKnown RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 PCOLCEQ15113 449 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 Q6ZSR3 168 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 FOXL2NBQ6ZUU3 175 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 OR11H4Q8NGC9 324 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 NXPE2Q96DL1 559 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 C1orf198Q9H425 327 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 KLK11Q9UBX7 282 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ING1Q9UK53 422 aaPredicted RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 SIT1Q9Y3P8 196 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ANXA3P12429 323 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 RPS27P42677 84 aaKnown RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 RIDAP52758 137 aaKnown RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 HSF1Q00613 529 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 C19orf57Q0VDD7 668 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 EIF2B1Q14232 305 aaKnown RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 IL11RAQ14626 422 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 PAPD4Q6PIY7 484 aaKnown RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 DNM1P34Q6PK57 102 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ZNF676Q8N7Q3 588 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ZNF700Q9H0M5 742 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 COA3Q9Y2R0 106 aaPredicted RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 CHCHD2Q9Y6H1 151 aaPredicted RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 TRBV11-1A0A0K0K1C0 115 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 SOX1O00570 391 aaPredicted RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 OR2A4O95047 310 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 PGA4P0DJD7 388 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 PGA3P0DJD8 388 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 CLDN12P56749 244 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 ADAM8P78325 824 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 QRFPP83859 136 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 EIF3IQ13347 325 aaKnown RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 CCDC92Q53HC0 331 aaPredicted RBP9.97□□□□□ -0.81
MSH3-201ENST00000265081 ZNF626Q68DY1 528 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 DNAAF1Q8NEP3 725 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 GPX8Q8TED1 209 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 OR2A7Q96R45 310 aa9.97□□□□□ -0.81
MSH3-201ENST00000265081 MYOZ1Q9NP98 299 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms