RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 A0A1W2PQF6 199 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF264O43296 627 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF254O75437 659 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 WISP1O95388 367 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 LDOC1O95751 146 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 NAGAP17050 411 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 DLSTP36957 453 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 CAPZA1P52907 286 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 EIF2B1Q14232 305 aaKnown RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 KLHL26Q53HC5 615 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF684Q5T5D7 378 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 OR1J4Q8NGS1 313 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 MRPS24Q96EL2 167 aaKnown RBP11.2□□□□□ -0.62
CHMP3-201ENST00000263856 DCBLD2Q96PD2 775 aa11.2□□□□□ -0.62
CHMP3-201ENST00000263856 ASXL3Q9C0F0 2248 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 LOC100289279A0A1B0GTE1 492 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 OR5H14A6NHG9 310 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 OR2AT4A6NND4 320 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF736B4DX44 427 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-201ENST00000263856 LMX1BO60663 402 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 ABHD16AO95870 558 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 TNFP01375 233 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 CD2P06729 351 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 AVPR2P30518 371 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 RPL35P42766 123 aaKnown RBP11.19□□□□□ -0.62
CHMP3-201ENST00000263856 OR1D4P47884 311 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 EIF2B5Q13144 721 aaKnown RBP11.19□□□□□ -0.62
CHMP3-201ENST00000263856 IL10RAQ13651 578 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 OR7A5Q15622 319 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 SLC22A6Q4U2R8 563 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 C1orf53Q5VUE5 145 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-201ENST00000263856 GVQW1Q8N7I0 195 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 OR13C3Q8NGS6 347 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 CCDC107Q8WV48 283 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 LRFN5Q96NI6 719 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 WDR13Q9H1Z4 485 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 RABL2AQ9UBK7 228 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-201ENST00000263856 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 RABL2BQ9UNT1 228 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 HIF3AQ9Y2N7 669 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 EMC9Q9Y3B6 208 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 TRBV5-5A0A0J9YX44 114 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 C2orf72A6NCS6 295 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 C5orf51A6NDU8 294 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 TUBAL3A6NHL2 446 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 UTS2O95399 124 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 HTR2CP28335 458 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 RPS4XP62701 263 aaKnown RBP11.19□□□□□ -0.62
CHMP3-201ENST00000263856 RASGEF1BQ0VAM2 473 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF169Q14929 603 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-201ENST00000263856 NR0B2Q15466 257 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 EXOSC6Q5RKV6 272 aaKnown RBP11.19□□□□□ -0.62
CHMP3-201ENST00000263856 CORO6Q6QEF8 472 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM184AQ6ZMB5 413 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 OVCH2Q7RTZ1 564 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 MRI1Q9BV20 369 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM106CQ9BVX2 250 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 TMPRSS13Q9BYE2 586 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 RTN4RQ9BZR6 473 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 OR11A1Q9GZK7 315 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 UPB1Q9UBR1 384 aa11.19□□□□□ -0.62
CHMP3-201ENST00000263856 HMSDA8MTL9 139 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 A8MXK9 166 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 FGF2P09038 288 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ATP1B3P54709 279 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TAS2R19P59542 299 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ACTBP60709 375 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ACTG1P63261 375 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 CXADRP78310 365 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 DHODHQ02127 395 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 RAB12Q6IQ22 244 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ATG4DQ86TL0 474 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-201ENST00000263856 C19orf47Q8N9M1 422 aaKnown RBP11.18□□□□□ -0.62
CHMP3-201ENST00000263856 BPIFCQ8NFQ6 507 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 MRGPRX1Q96LB2 322 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 MFRPQ9BY79 579 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 CRISPLD2Q9H0B8 497 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 UBQLN4Q9NRR5 601 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 UNC13CQ8NB66 2214 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TRAV14DV4A0A0A6YYC5 116 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 A6NCN8 305 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 SOX1O00570 391 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ICOSLGO75144 302 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 PNMTP11086 282 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 IL32P24001 234 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 MST1P26927 711 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 AKT2P31751 481 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 FOXL2P58012 376 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 DHRS2Q13268 280 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 GLT8D1Q68CQ7 371 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 COMMD2Q86X83 199 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF584Q8IVC4 421 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 NUDCD2Q8WVJ2 157 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TSLPQ969D9 159 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 MARC2Q969Z3 335 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ZBTB8AQ96BR9 441 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 SPACA5Q96QH8 159 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM231Q9H6L2 316 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms