RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 CT45A2Q5DJT8 189 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ACSM5Q6NUN0 579 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR4K13Q8NH42 304 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OPALINQ96PE5 141 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 NPAP1Q9NZP6 1156 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 LOC102723996A0A087X1L8 192 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 J3KTA2 159 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CBR3O75828 277 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF92Q03936 586 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 GGTLC2Q14390 218 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 C6orf15Q6UXA7 325 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 WDSUB1Q8N9V3 476 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CSNK2A3Q8NEV1 391 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 KATNB1Q9BVA0 655 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ST6GALNAC5Q9BVH7 336 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 PLEKHJ1Q9NW61 149 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 DUSP13Q9UII6 198 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF638Q14966 1978 aaKnown RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 DLSTP36957 453 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 PITPNBP48739 271 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 HOXA1P49639 335 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 RAG2P55895 527 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 LIPKQ5VXJ0 399 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 SIMC1Q8NDZ2 872 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR13C2Q8NGS9 318 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 IFI44Q8TCB0 444 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 TMEM255BQ8WV15 326 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 NUDT8Q8WV74 236 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 SULT4A1Q9BR01 284 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ETAA1Q9NY74 926 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 IGLV3-32A0A0A0MS00 114 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 LRRC30A6NM36 301 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 PPP1R3DO95685 299 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 NCS1P62166 190 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 TMEM31Q5JXX7 168 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CEACAM19Q7Z692 300 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CMTM1Q8IZ96 169 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR52I1Q8NGK6 324 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 TAAR8Q969N4 342 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF775Q96BV0 537 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 NUDT22Q9BRQ3 303 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ADAM19Q9H013 955 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 SDHAF2Q9NX18 166 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 PCYT1BQ9Y5K3 369 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 TRAV6A0A075B6T7 132 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR5H15A6NDH6 313 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR5H14A6NHG9 310 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR5H1A6NKK0 313 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 RAD1O60671 282 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 YES1P07947 543 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 GNB1P62873 340 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 PRAMEF20Q5VT98 475 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 LHFPL3Q86UP9 236 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 RBM45Q8IUH3 476 aaKnown RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR1J2Q8NGS2 313 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 LIN37Q96GY3 246 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ARRDC1-AS1Q9H2J1 176 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 SCPEP1Q9HB40 452 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CHST11Q9NPF2 352 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 KLHL9Q9P2J3 617 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 KLF13Q9Y2Y9 288 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 NYNRINQ9P2P1 1898 aaKnown RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 TRAPPC2LH3BP13 241 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 PRKRAO75569 313 aaKnown RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CRYZL1O95825 349 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 IFNA17P01571 189 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 FBXO45P0C2W1 286 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 BCKDHBP21953 392 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 PTGER4P35408 488 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 FUT5Q11128 374 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CDK5R1Q15078 307 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 USF2Q15853 346 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-201ENST00000262539 AARDQ4LEZ3 155 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR52W1Q6IF63 320 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 SPNS2Q8IVW8 549 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 OR4C3Q8NH37 302 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 TMEM9BQ9NQ34 198 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ANKRD10Q9NXR5 420 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 MGAT4CQ9UBM8 478 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 KNTC1P50748 2209 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 CD8B2A6NJW9 211 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 HSPB6O14558 160 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 UPK1BO75841 260 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 ITGB2P05107 769 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 CD8BP10966 210 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 F2RP25116 425 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 FGL1Q08830 312 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 OXA1LQ15070 435 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 SSX8Q7RTT4 187 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 PTPMT1Q8WUK0 201 aaPredicted RBP7.46□□□□□ -1.21
PTPN3-201ENST00000262539 SMIM19Q96E16 107 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 LMF1Q96S06 567 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 POLE4Q9NR33 117 aa7.46□□□□□ -1.21
PTPN3-201ENST00000262539 DDAH2O95865 285 aa7.46□□□□□ -1.22
PTPN3-201ENST00000262539 SERPINA5P05154 406 aa7.46□□□□□ -1.22
PTPN3-201ENST00000262539 CALCBP10092 127 aa7.46□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF17P17021 662 aa7.46□□□□□ -1.22
PTPN3-201ENST00000262539 SPI1P17947 270 aa7.46□□□□□ -1.22
PTPN3-201ENST00000262539 SKP2Q13309 424 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms