RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-202ENST00000262396 AKR7LQ8NHP1 331 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 MOSPD2Q8NHP6 518 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 ABHD4Q8TB40 342 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 PRSS27Q9BQR3 290 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 FNDC11Q9BVV2 318 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 ELOVL3Q9HB03 270 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 NKIRAS2Q9NYR9 191 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 IGLV3-9A0A075B6K5 115 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 LOC100653049A0A140TA62 436 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 A6NIZ1 184 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 XKRYO14609 159 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 WNT9BO14905 357 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 KRT34O76011 436 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 NPPAP01160 153 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 EPHA1P21709 976 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 LIPAP38571 399 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 CTXN1P60606 82 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 RAP1BP61224 184 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 RAP1AP62834 184 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 FMODQ06828 376 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 CYBRD1Q53TN4 286 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 C10orf128Q5T292 105 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 FAM205BPQ63HN1 556 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 RBMS3Q6XE24 437 aaKnown RBP10.45□□□□□ -0.74
TRAF4-202ENST00000262396 FKBP9P1Q75LS8 142 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 ZER1Q7Z7L7 766 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 C1orf174Q8IYL3 243 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 MICU2Q8IYU8 434 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 C3orf56Q8N813 242 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 OR2T12Q8NG77 320 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 NANPQ8TBE9 248 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 SLC25A40Q8TBP6 338 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 C10orf82Q8WW14 230 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 BPIFA2Q96DR5 249 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 ZNF426Q9BUY5 554 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 ALG12Q9BV10 488 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 SUCNR1Q9BXA5 334 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 TXNIPQ9H3M7 391 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 SMURF2Q9HAU4 748 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 C20orf141Q9NUB4 165 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 WIPI2Q9Y4P8 454 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 TIMM10BQ9Y5J6 103 aa10.45□□□□□ -0.74
TRAF4-202ENST00000262396 LOC105371242A0A075B767 164 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 HTR3EA5X5Y0 456 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 C12orf71A8MTZ7 269 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 EFCAB9A8MZ26 197 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 PLPP2O43688 288 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 RP2O75695 350 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 VENTXO95231 258 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 ZNF682O95780 498 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 ABHD16AO95870 558 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 IGHV3-13P01766 116 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 IFNW1P05000 195 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 GSTM3P21266 225 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 FPR2P25090 351 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 LAP3P28838 519 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 KDELR2P33947 212 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 YAP1P46937 504 aaKnown RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 RPL27P61353 136 aaKnown RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 LMO4P61968 165 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 PPP1CBP62140 327 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 HIST3H3Q16695 136 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 ZNF730Q6ZMV8 503 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 OAFQ86UD1 273 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 IGFN1Q86VF2 1251 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 MEX3DQ86XN8 651 aaKnown RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 OR51A7Q8NH64 312 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 ZFAND2BQ8WV99 257 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 IPCEF1Q8WWN9 437 aaPredicted RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 HDAC2Q92769 488 aaKnown RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 DCLRE1CQ96SD1 692 aaKnown RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 DIRC2Q96SL1 478 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 MRPL13Q9BYD1 178 aaKnown RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 OR2J1Q9GZK6 312 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 RACGAP1Q9H0H5 632 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 RERGLQ9H628 205 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 GRHPRQ9UBQ7 328 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 CGGBP1Q9UFW8 167 aaPredicted RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 NDRG4Q9ULP0 352 aaKnown RBP10.44□□□□□ -0.74
TRAF4-202ENST00000262396 AP3M1Q9Y2T2 418 aa10.44□□□□□ -0.74
TRAF4-202ENST00000262396 ELOVL7A1L3X0 281 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 FAM220BPB1ANY3 271 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 J3QLI3 93 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 FBP2O00757 339 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 PIP5K1CO60331 668 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 IGF2P01344 180 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 MMP7P09237 267 aaPredicted RBP10.43□□□□□ -0.74
TRAF4-202ENST00000262396 MAKP20794 623 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 MSR1P21757 451 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 TNFAIP6P98066 277 aaPredicted RBP10.43□□□□□ -0.74
TRAF4-202ENST00000262396 PSG4Q00888 419 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 KLF10Q13118 480 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 TRAM2Q15035 370 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 COQ5Q5HYK3 327 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 ARMC4Q5T2S8 1044 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 FAM27BQ5VT28 67 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 TSPYL5Q86VY4 417 aaPredicted RBP10.43□□□□□ -0.74
TRAF4-202ENST00000262396 CYP4Z1Q86W10 505 aa10.43□□□□□ -0.74
TRAF4-202ENST00000262396 KLF14Q8TD94 323 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms