RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SAMD12Q8N8I0 201 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR4D11Q8NGI4 311 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 THAP6Q8TBB0 222 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF160Q9HCG1 818 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 ENPP4Q9Y6X5 453 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 ASPMQ8IZT6 3477 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 A0A1B0GWJ7 208 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 SHISA3A0PJX4 238 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 TMEM200CA6NKL6 621 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 NPIPB9F8W1W9 429 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 H3BN98 237 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 M0R3H8 397 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 SYT5O00445 386 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 CLN5O75503 358 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZFAND5O76080 213 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 CELA2AP08217 269 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 NID1P14543 1247 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 ABCD3P28288 659 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 GPX4P36969 197 aaPredicted RBP17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 GMFBP60983 142 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 SLC30A6Q6NXT4 461 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 RBMS3Q6XE24 437 aaKnown RBP17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 C16orf47Q6ZP98 133 aaPredicted RBP17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 MEIOBQ8N635 442 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 OR5L2Q8NGL0 311 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 DIO2Q92813 273 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 NANSQ9NR45 359 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 IL17BQ9UHF5 180 aa17.08■□□□□ 0.32
COL4A3BP-201ENST00000261415 TMEM218A2RU14 115 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 J3KTA2 159 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 PHYHO14832 338 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 UBL3O95164 117 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 MST1P26927 711 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 PLCXD2Q0VAA5 305 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 RTP5Q14D33 572 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 TGIF1Q15583 401 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 FAM122BQ7Z309 247 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 CBLN2Q8IUK8 224 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 M1APQ8TC57 530 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 TMED9Q9BVK6 235 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 BEX1Q9HBH7 125 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 GPN1Q9HCN4 374 aaPredicted RBP17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 MMP25Q9NPA2 562 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 RASL12Q9NYN1 266 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 SLC13A4Q9UKG4 626 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 TLX2O43763 284 aaPredicted RBP17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 UBBP0CG47 229 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 UBCP0CG48 685 aaKnown RBP17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 LIPCP11150 499 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 CNR1P21554 472 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 FPR3P25089 353 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 RPS27AP62979 156 aaKnown RBP17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 UBA52P62987 128 aaKnown RBP17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZNF141Q15928 474 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 CDNFQ49AH0 187 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 MRGPREQ86SM8 312 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 RBM45Q8IUH3 476 aaKnown RBP17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZNF614Q8N883 585 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 PHOSPHO1Q8TCT1 267 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 RNFT2Q96EX2 444 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 ADOQ96SZ5 270 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 DEFB126Q9BYW3 111 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 FBXL4Q9UKA2 621 aa17.07■□□□□ 0.32
COL4A3BP-201ENST00000261415 PCNX3Q9H6A9 2034 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 LRRTM2O43300 516 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 TSPAN2O60636 221 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 REM1O75628 298 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 CD3GP09693 182 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 IL12BP29460 328 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 RNF144AP50876 292 aaPredicted RBP17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 NRG3P56975 720 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 ACSM1Q08AH1 577 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 EIPR1Q53HC9 387 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 SYT14P1Q58G82 188 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 TMEM255AQ5JRV8 349 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 MRPL2Q5T653 305 aaKnown RBP17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 BCDIN3DQ7Z5W3 292 aaKnown RBP17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 OR4C3Q8NH37 302 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 RXFP4Q8TDU9 374 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 PFDN5Q99471 154 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 ARHGDIGQ99819 225 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 BARX1Q9HBU1 254 aaPredicted RBP17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 P4HTMQ9NXG6 502 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 KLHL28Q9NXS3 571 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 MYOTQ9UBF9 498 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 CELSR3Q9NYQ7 3312 aa17.06■□□□□ 0.32
COL4A3BP-201ENST00000261415 LRRN3E7EW58 273 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 OR5M10Q6IEU7 315 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 MOB3CQ70IA8 216 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZFP82Q8N141 532 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 OR6T1Q8NGN1 323 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 PNPLA2Q96AD5 504 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 ZNF582Q96NG8 517 aaPredicted RBP17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 NKIRAS2Q9NYR9 191 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 TVP23BQ9NYZ1 205 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 FLRT3Q9NZU0 649 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 MED13Q9UHV7 2174 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 PLEKHA6Q9Y2H5 1048 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 CPAMD8Q8IZJ3 1885 aa17.05■□□□□ 0.32
COL4A3BP-201ENST00000261415 MEX3AA1L020 520 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms