RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 LINC01590Q5TEZ4 76 aa18.19■□□□□ 0.5
RTCA-201ENST00000260563 LINGO2Q7L985 606 aa18.19■□□□□ 0.5
RTCA-201ENST00000260563 TSPAN14Q8NG11 270 aa18.19■□□□□ 0.5
RTCA-201ENST00000260563 MCHR2Q969V1 340 aa18.19■□□□□ 0.5
RTCA-201ENST00000260563 LGALS12Q96DT0 336 aa18.19■□□□□ 0.5
RTCA-201ENST00000260563 ZMYND19Q96E35 227 aaPredicted RBP18.19■□□□□ 0.5
RTCA-201ENST00000260563 CRLF2Q9HC73 371 aa18.19■□□□□ 0.5
RTCA-201ENST00000260563 GPR35Q9HC97 309 aa18.19■□□□□ 0.5
RTCA-201ENST00000260563 FASNP49327 2511 aaKnown RBP18.19■□□□□ 0.5
RTCA-201ENST00000260563 IGKV1D-43A0A0B4J1Z2 117 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 RPL36A-HNRNPH2H7BZ11 118 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 KHDRBS3O75525 346 aaKnown RBP18.18■□□□□ 0.5
RTCA-201ENST00000260563 LYZL6O75951 148 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 ITGA5P08648 1049 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 QDPRP09417 244 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 GRNP28799 593 aaKnown RBP18.18■□□□□ 0.5
RTCA-201ENST00000260563 ATP6V1E1P36543 226 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 PIGFQ07326 219 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 ST3GAL4Q11206 333 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 GGTLC2Q14390 218 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 ETFDHQ16134 617 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 C9orf135Q5VTT2 229 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 STX19Q8N4C7 294 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 OR51G2Q8NGK0 314 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 ERVK-18Q9QC07 812 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 EXOGQ9Y2C4 368 aaKnown RBP18.18■□□□□ 0.5
RTCA-201ENST00000260563 PRSS44E7EML9 344 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 RGS10O43665 173 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 APOL3O95236 402 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 CDK1P06493 297 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 PSMB1P20618 241 aaKnown RBP18.18■□□□□ 0.5
RTCA-201ENST00000260563 IL32P24001 234 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 UGT2B10P36537 528 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 CENPAP49450 140 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 BLVRAP53004 296 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 FOXG1P55316 489 aaPredicted RBP18.18■□□□□ 0.5
RTCA-201ENST00000260563 SORDQ00796 357 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 POU4F2Q12837 409 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 CEACAM16Q2WEN9 425 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 SFRP5Q5T4F7 317 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 LRFN4Q6PJG9 635 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 SLC25A47Q6Q0C1 308 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 STAC2Q6ZMT1 411 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 OR52I1Q8NGK6 324 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 NSMAFQ92636 917 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 ADGRL4Q9HBW9 690 aa18.18■□□□□ 0.5
RTCA-201ENST00000260563 COA3Q9Y2R0 106 aaPredicted RBP18.18■□□□□ 0.5
RTCA-201ENST00000260563 CIB4A0PJX0 185 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 A1L4Q6 167 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 RAD51DO75771 328 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 HTR1AP08908 422 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 CCKARP32238 428 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 ZNF133P52736 654 aaPredicted RBP18.17■□□□□ 0.5
RTCA-201ENST00000260563 SH3BGRP55822 239 aaPredicted RBP18.17■□□□□ 0.5
RTCA-201ENST00000260563 TGFBR3Q03167 851 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 GLO1Q04760 184 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 ZNF773Q6PK81 442 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 SHFQ7M4L6 423 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 BHLHA15Q7RTS1 189 aaPredicted RBP18.17■□□□□ 0.5
RTCA-201ENST00000260563 ZNF433Q8N7K0 673 aaPredicted RBP18.17■□□□□ 0.5
RTCA-201ENST00000260563 OR4F15Q8NGB8 312 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 TMEM80Q96HE8 168 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 HDHD5Q9BXW7 423 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 CCDC90BQ9GZT6 254 aa18.17■□□□□ 0.5
RTCA-201ENST00000260563 FGF20Q9NP95 211 aaPredicted RBP18.17■□□□□ 0.5
RTCA-201ENST00000260563 NPDC1Q9NQX5 325 aaPredicted RBP18.17■□□□□ 0.5
RTCA-201ENST00000260563 A0A087WXM4 84 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 ZNF99A8MXY4 864 aaPredicted RBP18.16■□□□□ 0.5
RTCA-201ENST00000260563 C16orf97H3BN30 126 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 MRPS14O60783 128 aaKnown RBP18.16■□□□□ 0.5
RTCA-201ENST00000260563 RAB36O95755 333 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 FADS2O95864 444 aaKnown RBP18.16■□□□□ 0.5
RTCA-201ENST00000260563 GPANK1O95872 356 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 MRPL3P09001 348 aaKnown RBP18.16■□□□□ 0.5
RTCA-201ENST00000260563 SBK2P0C263 348 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 C21orf33P30042 268 aaPredicted RBP18.16■□□□□ 0.5
RTCA-201ENST00000260563 MVKQ03426 396 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 TSC22D1Q15714 1073 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 STK11Q15831 433 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 C10orf128Q5T292 105 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 LYPD4Q6UWN0 246 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 PRSS48Q7RTY5 328 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 ZNF511Q8NB15 262 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 FOXN4Q96NZ1 517 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 SIGLEC11Q96RL6 698 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 CNN2Q99439 309 aaKnown RBP18.16■□□□□ 0.5
RTCA-201ENST00000260563 COMMD3-BMI1R4GMX3 469 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 DOPEY2Q9Y3R5 2298 aa18.16■□□□□ 0.5
RTCA-201ENST00000260563 C19orf84I3L1E1 186 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 DHHO43323 396 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 CLDN1O95832 211 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 HLA-DQA2P01906 255 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 SMIM18P0DKX4 95 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 PEX19P40855 299 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 ZNF84P51523 738 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 GLB1L2Q8IW92 636 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 C1orf162Q8NEQ5 155 aaPredicted RBP18.15■□□□□ 0.5
RTCA-201ENST00000260563 STEAP2Q8NFT2 490 aa18.15■□□□□ 0.5
RTCA-201ENST00000260563 ZNF837Q96EG3 531 aaPredicted RBP18.15■□□□□ 0.5
RTCA-201ENST00000260563 ACTR6Q9GZN1 396 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms