RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 FAM157BP0CG42 384 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 CTLA4P16410 223 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 MAGEA2P43356 314 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 PSG4Q00888 419 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 PLP2Q04941 152 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 GPR139Q6DWJ6 353 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 SMARCD3Q6STE5 483 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 DPY19L2P2Q6ZN68 376 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 TRPM8Q7Z2W7 1104 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 AKR7LQ8NHP1 331 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 FAM168AQ92567 244 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 SYT3Q9BQG1 590 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 C1orf198Q9H425 327 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 CDH20Q9HBT6 801 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 FKBP7Q9Y680 259 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 HIVEP2P31629 2446 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 SOCS2O14508 198 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 AHCYL1O43865 530 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 SNAP29O95721 258 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 PTHP01270 115 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 CST2P09228 141 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 FPR3P25089 353 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 EVX1P49640 407 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 RPS23P62266 143 aaKnown RBP19.74■□□□□ 0.75
LSM4-201ENST00000252816 ENDOGQ14249 297 aaKnown RBP19.74■□□□□ 0.75
LSM4-201ENST00000252816 TBC1D28Q2M2D7 210 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 UGT2A3Q6UWM9 527 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 PTCHD4Q6ZW05 846 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 FANK1Q8TC84 345 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 POM121Q96HA1 1249 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 FOXN4Q96NZ1 517 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 WNT5BQ9H1J7 359 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 C1orf21Q9H246 121 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 SYT4Q9H2B2 425 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 OR51B6Q9H340 312 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 POLE4Q9NR33 117 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 MYEF2Q9P2K5 600 aaKnown RBP19.74■□□□□ 0.75
LSM4-201ENST00000252816 FBXO9Q9UK97 447 aaPredicted RBP19.74■□□□□ 0.75
LSM4-201ENST00000252816 TMCC3Q9ULS5 477 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 LYVE1Q9Y5Y7 322 aa19.74■□□□□ 0.75
LSM4-201ENST00000252816 ABCA1O95477 2261 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 TXNDC12O95881 172 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 ADRA2AP08913 450 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 CSF3P09919 207 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 MSR1P21757 451 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 GUCA1AP43080 201 aaPredicted RBP19.73■□□□□ 0.75
LSM4-201ENST00000252816 GSSP48637 474 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 HMGA2P52926 109 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 ERVS71-1P61550 626 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 RFX4Q33E94 735 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 PGBD2Q6P3X8 592 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 OR1J2Q8NGS2 313 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 CCDC124Q96CT7 223 aaKnown RBP19.73■□□□□ 0.75
LSM4-201ENST00000252816 ZNF416Q9BWM5 594 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 OR2H1Q9GZK4 316 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 RAB1BQ9H0U4 201 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 OR52D1Q9H346 318 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 DYNLRB1Q9NP97 96 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 EMC7Q9NPA0 242 aa19.73■□□□□ 0.75
LSM4-201ENST00000252816 VSX1Q9NZR4 365 aaPredicted RBP19.73■□□□□ 0.75
LSM4-201ENST00000252816 LOC100509620A0A075B734 347 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 KRT36O76013 467 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 UBOX5O94941 541 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 PPP1R3DO95685 299 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 STOMP27105 288 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 APLNRP35414 380 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 CDKN2AP42771 156 aaKnown RBP19.72■□□□□ 0.75
LSM4-201ENST00000252816 C1orf94Q6P1W5 598 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 POM121L2Q96KW2 1035 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 THTPAQ9BU02 230 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 MAGIXQ9H6Y5 334 aa19.72■□□□□ 0.75
LSM4-201ENST00000252816 TNFRSF11BO00300 401 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 SYNGR3O43761 229 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 SLC16A7O60669 478 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 APEHP13798 732 aaKnown RBP19.71■□□□□ 0.75
LSM4-201ENST00000252816 SLC25A16P16260 332 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 CCNOP22674 350 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 PCSK6P29122 969 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 IFNGR2P38484 337 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 ALDH3B1P43353 468 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 PDLIM4P50479 330 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 RPS6KA3P51812 740 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 UCP2P55851 309 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 MAD2L1BPQ15013 274 aaPredicted RBP19.71■□□□□ 0.75
LSM4-201ENST00000252816 OTPQ5XKR4 325 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 RGS7BPQ6MZT1 257 aaPredicted RBP19.71■□□□□ 0.75
LSM4-201ENST00000252816 ADCK1Q86TW2 530 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 OR9Q2Q8NGE9 314 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 OR4C15Q8NGM1 316 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 GNPDA2Q8TDQ7 276 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 ASB9Q96DX5 294 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 SAMD8Q96LT4 415 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 ERMAPQ96PL5 475 aaPredicted RBP19.71■□□□□ 0.75
LSM4-201ENST00000252816 BTBD10Q9BSF8 475 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 LRMDAQ9H2I8 198 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 TPK1Q9H3S4 243 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 VNN3Q9NY84 501 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 REV1Q9UBZ9 1251 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 DUSP13Q9UII6 198 aa19.71■□□□□ 0.75
LSM4-201ENST00000252816 TIMM10BQ9Y5J6 103 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms