RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 MFGE8Q08431 387 aaPredicted RBP16.5■□□□□ 0.23
HOXC11-201ENST00000243082 B3GNTL1Q67FW5 361 aaPredicted RBP16.5■□□□□ 0.23
HOXC11-201ENST00000243082 TIGD3Q6B0B8 471 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 TMEM225Q6GV28 225 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 PYHIN1Q6K0P9 492 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 H3F3CQ6NXT2 135 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 TMPPEQ6ZT21 453 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 GPAT4Q86UL3 456 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 UBQLNLQ8IYU4 475 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 OXGR1Q96P68 337 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 RBP7Q96R05 134 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 TRAV8-7A0A075B6U6 113 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 AQP7P3A6NL99 342 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 H3BSH0 61 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 SULT2B1O00204 365 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 SRSF10O75494 262 aaKnown RBP16.49■□□□□ 0.23
HOXC11-201ENST00000243082 ZNF806P0C7X5 589 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 PGA4P0DJD7 388 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 PGA3P0DJD8 388 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 MAP2K3P46734 347 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 AGAP6Q5VW22 663 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 DCXRQ7Z4W1 244 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 RAB43Q86YS6 212 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 LINC00346Q8IVM7 164 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 GLB1L2Q8IW92 636 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 ZNF671Q8TAW3 534 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 TRIM63Q969Q1 353 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 MCHR2Q969V1 340 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 TMEM106AQ96A25 262 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 SGCZQ96LD1 299 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 JSRP1Q96MG2 331 aaPredicted RBP16.49■□□□□ 0.23
HOXC11-201ENST00000243082 AGAP4Q96P64 663 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 THAP7Q9BT49 309 aaPredicted RBP16.49■□□□□ 0.23
HOXC11-201ENST00000243082 SLITRK2Q9H156 845 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 SDK2Q58EX2 2172 aa16.49■□□□□ 0.23
HOXC11-201ENST00000243082 RPS15P62841 145 aaKnown RBP16.48■□□□□ 0.23
HOXC11-201ENST00000243082 SLC35A1P78382 337 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 CAMK2DQ13557 499 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 THEM4Q5T1C6 240 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 CATSPERDQ86XM0 798 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 ADAMTS14Q8WXS8 1223 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 C11orf40Q8WZ69 217 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 SLC25A44Q96H78 314 aaPredicted RBP16.48■□□□□ 0.23
HOXC11-201ENST00000243082 TMEM41AQ96HV5 264 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 CMTM3Q96MX0 182 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 RYDENQ9NUL5 291 aaKnown RBP16.48■□□□□ 0.23
HOXC11-201ENST00000243082 RBFOX1Q9NWB1 397 aaKnown RBP16.48■□□□□ 0.23
HOXC11-201ENST00000243082 P4HTMQ9NXG6 502 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 LOC102725191A0A1B0GVB3 256 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 OR2M5A3KFT3 312 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 LYRM1O43325 122 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 TMEM127O75204 238 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 CBR3O75828 277 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 PMS2P2O95744 297 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 MT-CO3P00414 261 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 FAM157BP0CG42 384 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 ESPNLQ6ZVH7 1005 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 NOXO1Q8NFA2 376 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 OR6X1Q8NH79 312 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 ZC3HAV1LQ96H79 300 aaKnown RBP16.48■□□□□ 0.23
HOXC11-201ENST00000243082 FBXL3Q9UKT7 428 aa16.48■□□□□ 0.23
HOXC11-201ENST00000243082 TFECO14948 347 aaPredicted RBP16.47■□□□□ 0.23
HOXC11-201ENST00000243082 IGHG1P01857 330 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 SERPINA7P05543 415 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 PRKAR1AP10644 381 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 TPTEP56180 551 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 CLRN1P58418 232 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 H3F3AP84243 136 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 UBE2NLQ5JXB2 153 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 STPG1Q5TH74 334 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 RAET1LQ5VY80 246 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 RFT1Q96AA3 541 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 EDEM2Q9BV94 578 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 HDHD2Q9H0R4 259 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 DKKL1Q9UK85 242 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 GTF2A1LQ9UNN4 478 aa16.47■□□□□ 0.23
HOXC11-201ENST00000243082 CCDC187A0A096LP49 1063 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 A0A0G2JMM0 328 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 A0A1W2PPB8 328 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 A0A1W2PRS3 328 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 KIR3DP1A8MWS1 328 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 RAD1O60671 282 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 UBL3O95164 117 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 ADRB1P08588 477 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 ZNF43P17038 809 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 LAP3P28838 519 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 INPP1P49441 399 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 CLDN12P56749 244 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 ACER2Q5QJU3 275 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 MZT2BQ6NZ67 158 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 CORO6Q6QEF8 472 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 AKAP14Q86UN6 197 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 CMTM4Q8IZR5 234 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 DUSP18Q8NEJ0 188 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 ENKURQ8TC29 256 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 LIN7BQ9HAP6 207 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 R4GMQ9 66 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 MAS1P04201 325 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 NR4A2P43354 598 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 DNASE1L1P49184 302 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms