RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 OPN1MW2P0DN77 364 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 OPN1MW3P0DN78 364 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 CMTM1Q8IZ96 169 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 OR13D1Q8NGV5 346 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 TP53RKQ96S44 253 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF727A8MUV8 499 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 MSTNO14793 375 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 GALR3O60755 368 aaPredicted RBP11.81□□□□□ -0.52
VAMP4-201ENST00000236192 H2BFMP0C1H6 154 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 KIAA0040Q15053 153 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 PRSS54Q6PEW0 395 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF695Q8IW36 515 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 OR10AD1Q8NGE0 317 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 MCHR2Q969V1 340 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 JAM3Q9BX67 310 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 ASCL3Q9NQ33 180 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
VAMP4-201ENST00000236192 CBLN4Q9NTU7 201 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 C5AR2Q9P296 337 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 OR52A1Q9UKL2 312 aa11.81□□□□□ -0.52
VAMP4-201ENST00000236192 BCORQ6W2J9 1755 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 E5RGE8 158 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 GEMIN2O14893 280 aaKnown RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 SLC35G6P0C7Q6 338 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ACTR1AP61163 376 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 PRR27Q6MZM9 219 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 STAC2Q6ZMT1 411 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 TMEM91Q6ZNR0 172 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 SLC26A10Q8NG04 563 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 OR56B2PQ8NGI1 322 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 RBMXL1Q96E39 390 aaKnown RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 SLC17A9Q9BYT1 436 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 SMG9Q9H0W8 520 aaKnown RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ZDHHC8Q9ULC8 765 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 NSG2Q9Y328 171 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF749O43361 778 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 LINC00614P0C842 121 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 OR8G3PP0DMU2 310 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 FABP6P51161 128 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 JAG1P78504 1218 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 KCNAB1Q14722 419 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 RNF165Q6ZSG1 346 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ZDHHC22Q8N966 263 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF738Q8NE65 137 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 TMEM37Q8WXS4 190 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF514Q96K75 400 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 TAAR9Q96RI9 348 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 TRBV5-3A0A0A0MS03 114 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 FTCDNL1E5RQL4 147 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 NUDT21O43809 227 aaKnown RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF888P0CJ79 500 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 NPY4RP50391 375 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ALG10BQ5I7T1 473 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 PRAMEF8Q5VWM4 474 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 PRAMEF7Q5VXH5 474 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 OR4C11Q6IEV9 310 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 TOMM40LQ969M1 308 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 SOHLH2Q9NX45 425 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ATAD5Q96QE3 1844 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 GPR137BO60478 399 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 MPIG6BO95866 241 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 CRYABP02511 175 aaKnown RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 SELLP14151 372 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 TEAD1P28347 426 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 IRS1P35568 1242 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ARRB1P49407 418 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ALG10Q5BKT4 473 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 FAM182BQ5T319 152 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 DRAM2Q6UX65 266 aa11.8□□□□□ -0.52
VAMP4-201ENST00000236192 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 MRPL37Q9BZE1 423 aaKnown RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF443Q9Y2A4 671 aaPredicted RBP11.8□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF320A2RRD8 509 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 FOXE1O00358 373 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 GRM6O15303 877 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 MOSPD3O75425 235 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 DIRAS3O95661 229 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 GPANK1O95872 356 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 HMGN2P05204 90 aaKnown RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 ECI1P42126 302 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 CD300LDQ6UXZ3 194 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF100Q8IYN0 542 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 DND1Q8IYX4 353 aaKnown RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 TCTEX1D1Q8N7M0 179 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF511Q8NB15 262 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 ZFP62Q8NB50 900 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 OR51F2Q8NH61 342 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 TMEM255BQ8WV15 326 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 SLC22A18Q96BI1 424 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 PIAS3Q9Y6X2 628 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 CEBPZOSA8MTT3 80 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 TNFSF12O43508 249 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 HPNP05981 417 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 GZMMP51124 257 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 POM121L1PQ3SYA9 428 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 NBPF12Q5TAG4 269 aaPredicted RBP11.79□□□□□ -0.52
VAMP4-201ENST00000236192 DCAF12L2Q5VW00 463 aa11.79□□□□□ -0.52
VAMP4-201ENST00000236192 NCR3LG1Q68D85 454 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms