RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ACTA2P62736 377 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 RPS25P62851 125 aaKnown RBP16.44■□□□□ 0.22
SNX17-201ENST00000233575 ACTG2P63267 376 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 RPUSD3Q6P087 351 aaKnown RBP16.44■□□□□ 0.22
SNX17-201ENST00000233575 CORO6Q6QEF8 472 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 SPATC1Q76KD6 591 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 LINGO2Q7L985 606 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 SYS1Q8N2H4 156 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 ZCCHC14Q8WYQ9 949 aaKnown RBP16.44■□□□□ 0.22
SNX17-201ENST00000233575 UFD1Q92890 307 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 ALKBH3Q96Q83 286 aaPredicted RBP16.44■□□□□ 0.22
SNX17-201ENST00000233575 CENPOQ9BU64 300 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 CALHM2Q9HA72 323 aa16.44■□□□□ 0.22
SNX17-201ENST00000233575 SF3B6Q9Y3B4 125 aaKnown RBP16.44■□□□□ 0.22
SNX17-201ENST00000233575 CENPBD1B2RD01 187 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 ZNF823P16415 610 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 Q8NA96 180 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 RNF166Q96A37 237 aaPredicted RBP16.43■□□□□ 0.22
SNX17-201ENST00000233575 TM9SF2Q99805 663 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 TRIM36Q9NQ86 728 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 FREM1Q5H8C1 2179 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 IGHV3-9P01782 118 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 ZNF133P52736 654 aaPredicted RBP16.43■□□□□ 0.22
SNX17-201ENST00000233575 EIF2B1Q14232 305 aaKnown RBP16.43■□□□□ 0.22
SNX17-201ENST00000233575 C10orf128Q5T292 105 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 FGD2Q7Z6J4 655 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 NDNFQ8TB73 568 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 FNDC8Q8TC99 324 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 DCLRE1CQ96SD1 692 aaKnown RBP16.43■□□□□ 0.22
SNX17-201ENST00000233575 ABHD6Q9BV23 337 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 RBM24Q9BX46 236 aaKnown RBP16.43■□□□□ 0.22
SNX17-201ENST00000233575 ULBP2Q9BZM5 246 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 SLCO1C1Q9NYB5 712 aa16.43■□□□□ 0.22
SNX17-201ENST00000233575 NOSIPQ9Y314 301 aaKnown RBP16.43■□□□□ 0.22
SNX17-201ENST00000233575 TRIM64BA6NI03 449 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 SLC22A20A6NK97 555 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 SLC43A1O75387 559 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 ABHD16AO95870 558 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 HRGP04196 525 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 CRYBB2P43320 205 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 PCK2Q16822 640 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 LRRN1Q6UXK5 716 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 HSD17B8Q92506 261 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 PNPLA2Q96AD5 504 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 TMEM45BQ96B21 275 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 BCO1Q9HAY6 547 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 ST6GALNAC2Q9UJ37 374 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 IKZF2Q9UKS7 526 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 TMEM14AQ9Y6G1 99 aa16.42■□□□□ 0.22
SNX17-201ENST00000233575 DHHO43323 396 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 RPP14O95059 124 aaKnown RBP16.41■□□□□ 0.22
SNX17-201ENST00000233575 BDH1Q02338 343 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 INSL4Q14641 139 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 SLC18B1Q6NT16 456 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 ARL9Q6T311 187 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 DCXRQ7Z4W1 244 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 ADGRE4PQ86SQ3 457 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 MED12LQ86YW9 2145 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 MNTQ99583 582 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 TMED9Q9BVK6 235 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 CRLF2Q9HC73 371 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 POLE4Q9NR33 117 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 GPR171O14626 319 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 MRPL33O75394 65 aaKnown RBP16.41■□□□□ 0.22
SNX17-201ENST00000233575 ZNF182P17025 639 aaPredicted RBP16.41■□□□□ 0.22
SNX17-201ENST00000233575 NFATC3Q12968 1075 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 INAQ16352 499 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 TEX30Q5JUR7 227 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 TSPO2Q5TGU0 170 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 LIPNQ5VXI9 398 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 OR10H5Q8NGA6 315 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 ST7LQ8TDW4 575 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 SARAFQ96BY9 339 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 EXOSC4Q9NPD3 245 aaKnown RBP16.41■□□□□ 0.22
SNX17-201ENST00000233575 CLCF1Q9UBD9 225 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 CYB5R1Q9UHQ9 305 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 LHFPL6Q9Y693 200 aa16.41■□□□□ 0.22
SNX17-201ENST00000233575 NR2C1P13056 603 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 PSMA1P25786 263 aaKnown RBP16.4■□□□□ 0.22
SNX17-201ENST00000233575 NANOS3P60323 173 aaKnown RBP16.4■□□□□ 0.22
SNX17-201ENST00000233575 EGR3Q06889 387 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 SLC3A1Q07837 685 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 RNPS1Q15287 305 aaKnown RBP16.4■□□□□ 0.22
SNX17-201ENST00000233575 NUFIP2Q7Z417 695 aaKnown RBP16.4■□□□□ 0.22
SNX17-201ENST00000233575 YIPF7Q8N8F6 280 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 NABP1Q96AH0 204 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 INTS12Q96CB8 462 aaKnown RBP16.4■□□□□ 0.22
SNX17-201ENST00000233575 MAP6Q96JE9 813 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 OR8B4Q96RC9 309 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 TRIB1Q96RU8 372 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 CDADC1Q9BWV3 514 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 EMC3Q9P0I2 261 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 STUB1Q9UNE7 303 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 METTL15A6NJ78 407 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 ZNF724A8MTY0 619 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 DVL2O14641 736 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 KRT8P05787 483 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 YES1P07947 543 aa16.4■□□□□ 0.22
SNX17-201ENST00000233575 GBX2P52951 348 aaPredicted RBP16.4■□□□□ 0.22
SNX17-201ENST00000233575 SIRPAP78324 504 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms