RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 C12orf71A8MTZ7 269 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 G3V2T6 193 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 HS3ST1O14792 307 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 SEC14L2O76054 403 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 SLC2A10O95528 541 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 IGLV1-44P01699 117 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 HLA-HP01893 362 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 BMP4P12644 408 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 MSR1P21757 451 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 LOXP28300 417 aaPredicted RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 PTDSS1P48651 473 aaKnown RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 FXYD6P3P58550 94 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 NPRL3Q12980 569 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 KPNB1Q14974 876 aaKnown RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 SGCAQ16586 387 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF672Q499Z4 452 aaPredicted RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 FAM27BQ5VT28 67 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 LEG1Q6P5S2 330 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 Q71RC1 249 aaPredicted RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 SYT9Q86SS6 491 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 MDP1Q86V88 176 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 GLB1L2Q8IW92 636 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 WDFY1Q8IWB7 410 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 SKA3Q8IX90 412 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 ALDH16A1Q8IZ83 802 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF611Q8N823 705 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 OR1J2Q8NGS2 313 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 UTP4Q969X6 686 aaKnown RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 RASD2Q96D21 266 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 CENPNQ96H22 339 aaPredicted RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 SYT4Q9H2B2 425 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 EGLN3Q9H6Z9 239 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 B3GNT2Q9NY97 397 aa9.82□□□□□ -0.84
SF3B6-201ENST00000233468 CISD1Q9NZ45 108 aaKnown RBP9.82□□□□□ -0.84
SF3B6-201ENST00000233468 IGHV1-18A0A0C4DH31 117 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 RIIAD1A6NNX1 92 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 H7C1C5 153 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 SLC16A7O60669 478 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 HMGN1P05114 100 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 SERPINA5P05154 406 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 CST2P09228 141 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 OSMP13725 252 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 HIST1H1CP16403 213 aaKnown RBP9.81□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF23P17027 643 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF3P17036 446 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 LAP3P28838 519 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 GIPRP48546 466 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 IDH3GP51553 393 aaPredicted RBP9.81□□□□□ -0.84
SF3B6-201ENST00000233468 LCN6P62502 163 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 TUBA1BP68363 451 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 TUBA4AP68366 448 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 GALK2Q01415 458 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 HSF2Q03933 536 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 GLO1Q04760 184 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 FMODQ06828 376 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 PIGFQ07326 219 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 SLC36A3Q495N2 470 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF544Q6NX49 715 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 SLC27A4Q6P1M0 643 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 UNQ6126/PRO20091Q6UXV3 157 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 FOXL2NBQ6ZUU3 175 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 TUBA1AQ71U36 451 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 LNX2Q8N448 690 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 WFDC11Q8NEX6 87 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 OR2T4Q8NH00 348 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 OR4K13Q8NH42 304 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 TMEM171Q8WVE6 324 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 CCL19Q99731 98 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 SH3GL3Q99963 347 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 NIPSNAP1Q9BPW8 284 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 PRRG3Q9BZD7 231 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 CXorf56Q9H5V9 222 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 RERGLQ9H628 205 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 PAPOLBQ9NRJ5 636 aaKnown RBP9.81□□□□□ -0.84
SF3B6-201ENST00000233468 FBXO9Q9UK97 447 aaPredicted RBP9.81□□□□□ -0.84
SF3B6-201ENST00000233468 TIMM10BQ9Y5J6 103 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 FKBP7Q9Y680 259 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 ATP23Q9Y6H3 246 aa9.81□□□□□ -0.84
SF3B6-201ENST00000233468 SHISA9B4DS77 424 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 BHLHE40O14503 412 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 CECR9P0C854 216 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 PAICSP22234 425 aaKnown RBP9.8□□□□□ -0.84
SF3B6-201ENST00000233468 POU1F1P28069 291 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 CDAP32320 146 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 APLNRP35414 380 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 CDKN2AP42771 156 aaKnown RBP9.8□□□□□ -0.84
SF3B6-201ENST00000233468 CENPAP49450 140 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 BLVRAP53004 296 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 RPS23P62266 143 aaKnown RBP9.8□□□□□ -0.84
SF3B6-201ENST00000233468 LSM6P62312 80 aaKnown RBP9.8□□□□□ -0.84
SF3B6-201ENST00000233468 ESRRGP62508 458 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 NAAAQ02083 359 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.8□□□□□ -0.84
SF3B6-201ENST00000233468 SCRN3Q0VDG4 424 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 ZSCAN26Q16670 478 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 TBC1D28Q2M2D7 210 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 AGAP6Q5VW22 663 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 TMEM179BQ7Z7N9 219 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 FBXL14Q8N1E6 418 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 LRRC18Q8N456 261 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms