RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CDK5Q00535 292 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 DEFB115Q30KQ5 88 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 B3GNTL1Q67FW5 361 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 NLGN4XQ8N0W4 816 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 GPR119Q8TDV5 335 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 WDR83Q9BRX9 315 aaKnown RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 MARVELD1Q9BSK0 173 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 JAM3Q9BX67 310 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ACTR3CQ9C0K3 210 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 MEIKINA0A087WXM9 373 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 PHOX2AO14813 284 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 DIO1P49895 249 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 P2RX1P51575 399 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TRNP1Q6NT89 227 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 FOXJ1Q92949 421 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ADOQ96SZ5 270 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 GLIPR2Q9H4G4 154 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 LHX6Q9UPM6 363 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 RNASEK-C17orf49H0YIS7 233 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 GPR31O00270 319 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 GABREP78334 506 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 HTR3DQ70Z44 454 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TMEM255BQ8WV15 326 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ZFC3H1O60293 1989 aaKnown RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 LRP6O75581 1613 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 XRCC3O43542 346 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 KLK8O60259 260 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 GCH1P30793 250 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SLC10A1Q14973 349 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 MANEAQ5SRI9 462 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TFAP2EQ6VUC0 442 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SLC35D2Q76EJ3 337 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 CATSPERDQ86XM0 798 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 EXD3Q8N9H8 876 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 BPIFCQ8NFQ6 507 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 OR4N2Q8NGD1 307 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 OR13D1Q8NGV5 346 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 UBE2FQ969M7 185 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 CHRDL1Q9BU40 450 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SPTBP11277 2137 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ABCA1O95477 2261 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SCO1O75880 301 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 SLC35E2P0CK97 266 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 DVL1P1P54792 670 aaPredicted RBP7.56□□□□□ -1.2
APOB-201ENST00000233242 PPP1R3BQ86XI6 285 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 PNPLA1Q8N8W4 532 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 ANKLE1Q8NAG6 615 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 PPP1R1CQ8WVI7 109 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 TECTBQ96PL2 329 aa7.56□□□□□ -1.2
APOB-201ENST00000233242 FAM227AF5H4B4 570 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 CFIP05156 583 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 FKBP2P26885 142 aaKnown RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 PTGER4P35408 488 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 EIF1P41567 113 aaKnown RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 SLC6A11P48066 632 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 CAMKMTQ7Z624 323 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 THAP3Q8WTV1 239 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 DUSP22Q9NRW4 184 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 DNAJB11Q9UBS4 358 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 SLC19A1P41440 591 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 LIPIQ6XZB0 460 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 AMIGO3Q86WK7 504 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 BCL2L10Q9HD36 194 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 OSGIN2Q9Y236 505 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 TIMP2P16035 220 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 KCNJ3P48549 501 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.55□□□□□ -1.2
APOB-201ENST00000233242 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 SLC48A1Q6P1K1 146 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 ARRDC1Q8N5I2 433 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 TM4SF18Q96CE8 201 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 VAMP8Q9BV40 100 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 RNF167Q9H6Y7 350 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 CHAC2Q8WUX2 184 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 HS3ST2Q9Y278 367 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 SVILO95425 2214 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 RTTNQ86VV8 2226 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 SUSD5O60279 629 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 HAGHQ16775 308 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 MFSD12Q6NUT3 480 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 NHLRC2Q8NBF2 726 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 EIF1BO60739 113 aaKnown RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 F13BP05160 661 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 HOXA1P49639 335 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 PNLIPRP3Q17RR3 467 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 TCTN2Q96GX1 697 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 SGIP1Q9BQI5 828 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 TM7SF3Q9NS93 570 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 TAPBPO15533 448 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 VASPP50552 380 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 IKZF1Q13422 519 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 CCL14Q16627 93 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 ZNF787Q6DD87 383 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 RPA2P15927 270 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 UBXN2BQ14CS0 331 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 TESK1Q15569 626 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 FAM69BQ5VUD6 431 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 C11orf87Q6NUJ2 197 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 PLXDC2Q6UX71 529 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms