RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 ZNF544Q6NX49 715 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 OR6N1Q8NGY5 312 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 OR52N5Q8NH56 324 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 C11orf40Q8WZ69 217 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 RNF166Q96A37 237 aaPredicted RBP21.13■□□□□ 0.97
RRP9-201ENST00000232888 FOXN4Q96NZ1 517 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 ZNF385AQ96PM9 386 aaKnown RBP21.13■□□□□ 0.97
RRP9-201ENST00000232888 SLC6A15Q9H2J7 730 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 ZDHHC11Q9H8X9 412 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 HMG20AQ9NP66 347 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 SNTG1Q9NSN8 517 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 SLCO1C1Q9NYB5 712 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 ZNF281Q9Y2X9 895 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 PEX16Q9Y5Y5 336 aa21.13■□□□□ 0.97
RRP9-201ENST00000232888 MPZL1O95297 269 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 PSKH1P11801 424 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 PSMB10P40306 273 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 BMXP51813 675 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 MEP1BQ16820 701 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 YIF1BQ5BJH7 314 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 LRFN4Q6PJG9 635 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 FCRLAQ7L513 359 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 SNIP1Q8TAD8 396 aaKnown RBP21.12■□□□□ 0.97
RRP9-201ENST00000232888 WDR12Q9GZL7 423 aaKnown RBP21.12■□□□□ 0.97
RRP9-201ENST00000232888 ELOVL3Q9HB03 270 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 FLVCR1Q9Y5Y0 555 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 ALPK2Q86TB3 2170 aa21.12■□□□□ 0.97
RRP9-201ENST00000232888 CLDN25C9JDP6 229 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 OPRL1P41146 370 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 RPS27P42677 84 aaKnown RBP21.11■□□□□ 0.97
RRP9-201ENST00000232888 GUCA1AP43080 201 aaPredicted RBP21.11■□□□□ 0.97
RRP9-201ENST00000232888 CCR9P51686 369 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 RASGEF1BQ0VAM2 473 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 ZNF846Q147U1 533 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 ACSM3Q53FZ2 586 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 CEACAM19Q7Z692 300 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 KRT77Q7Z794 578 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 TPRA1Q86W33 373 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 C20orf196Q8IYI0 205 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 RNF128Q8TEB7 428 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 DCLRE1CQ96SD1 692 aaKnown RBP21.11■□□□□ 0.97
RRP9-201ENST00000232888 CCDC86Q9H6F5 360 aaKnown RBP21.11■□□□□ 0.97
RRP9-201ENST00000232888 FOXD3Q9UJU5 478 aaPredicted RBP21.11■□□□□ 0.97
RRP9-201ENST00000232888 PTPRZ1P23471 2315 aaPredicted RBP21.11■□□□□ 0.97
RRP9-201ENST00000232888 CNTRLQ7Z7A1 2325 aa21.11■□□□□ 0.97
RRP9-201ENST00000232888 IQCMA0A1B0GVH7 501 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 PSMD9O00233 223 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 CASKO14936 926 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 SYNGR4O95473 234 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 S100A5P33763 92 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 RIDAP52758 137 aaKnown RBP21.1■□□□□ 0.97
RRP9-201ENST00000232888 IGFL3Q6UXB1 125 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 FOXL2NBQ6ZUU3 175 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 RHOUQ7L0Q8 258 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.1■□□□□ 0.97
RRP9-201ENST00000232888 ST7LQ8TDW4 575 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 AP3S1Q92572 193 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 BORCS5Q969J3 196 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 AMELYQ99218 206 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 AKIP1Q9NQ31 210 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 CYB5R1Q9UHQ9 305 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 SSUH2Q9Y2M2 353 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 FREM3P0C091 2139 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 IGKV3D-15A0A087WSY6 115 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 A0A1W2PPL8 197 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 TMEM212A6NML5 194 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 GPR171O14626 319 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 SLC43A1O75387 559 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 ARL6IP5O75915 188 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 RPP14O95059 124 aaKnown RBP21.1■□□□□ 0.97
RRP9-201ENST00000232888 UNQ9370/PRO34162Q6UXP9 181 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 CROCCP3Q8IVE0 287 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 OR2G2Q8NGZ5 317 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 ROBO4Q8WZ75 1007 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 TMEM45BQ96B21 275 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 DCBLD2Q96PD2 775 aa21.1■□□□□ 0.97
RRP9-201ENST00000232888 C6orf62Q9GZU0 229 aaPredicted RBP21.1■□□□□ 0.97
RRP9-201ENST00000232888 ING1Q9UK53 422 aaPredicted RBP21.1■□□□□ 0.97
RRP9-201ENST00000232888 MCTS1Q9ULC4 181 aaKnown RBP21.1■□□□□ 0.97
RRP9-201ENST00000232888 DMXL1Q9Y485 3027 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 TRGV5A0A0B4J1U4 118 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 CFL1P23528 166 aaKnown RBP21.09■□□□□ 0.97
RRP9-201ENST00000232888 MYL9P24844 172 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 NANOS3P60323 173 aaKnown RBP21.09■□□□□ 0.97
RRP9-201ENST00000232888 LSM6P62312 80 aaKnown RBP21.09■□□□□ 0.97
RRP9-201ENST00000232888 LRRN1Q6UXK5 716 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 DCXRQ7Z4W1 244 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 ZADH2Q8N4Q0 377 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 OR5AK2Q8NH90 309 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 RNF133Q8WVZ7 376 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 THRSPQ92748 146 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 MAP6Q96JE9 813 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 SCNM1Q9BWG6 230 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 BARHL1Q9BZE3 327 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 COMMD4Q9H0A8 199 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 C1orf198Q9H425 327 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 LDAHQ9H6V9 325 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 SEC61A2Q9H9S3 476 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 RNF122Q9H9V4 155 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 FRRS1LQ9P0K9 344 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms