RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 RIDAP52758 137 aaKnown RBP9.35□□□□□ -0.91
MCM3-201ENST00000229854 HTRA3P83110 453 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 PYY3Q5JQD4 70 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 EXOSC6Q5RKV6 272 aaKnown RBP9.35□□□□□ -0.91
MCM3-201ENST00000229854 TMEM229BQ8NBD8 167 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 RRNAD1Q96FB5 475 aaKnown RBP9.35□□□□□ -0.91
MCM3-201ENST00000229854 C14orf144Q96I85 54 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 TSSK2Q96PF2 358 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 DEFB118Q96PH6 123 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 SSX3Q99909 188 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 CRISPLD2Q9H0B8 497 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 PARP12Q9H0J9 701 aaKnown RBP9.35□□□□□ -0.91
MCM3-201ENST00000229854 HCFC1R1Q9NWW0 138 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 MRPS33Q9Y291 106 aaKnown RBP9.35□□□□□ -0.91
MCM3-201ENST00000229854 C9orf170A2RU37 121 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 CXorf65A6NEN9 183 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 NPIPB9F8W1W9 429 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 FBXO24O75426 580 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 NDUFB2O95178 105 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 LYPD3O95274 346 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 ITGA5P08648 1049 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 LSSP48449 732 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 GSK3AP49840 483 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 SRSF4Q08170 494 aaKnown RBP9.35□□□□□ -0.91
MCM3-201ENST00000229854 DUSP8Q13202 625 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 PPP1R3BQ86XI6 285 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 FRMD1Q8N878 549 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 OR13C8Q8NGS7 320 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 ZNF417Q8TAU3 575 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 COMMD4Q9H0A8 199 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 OPA3Q9H6K4 179 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 CYTL1Q9NRR1 136 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 CACFD1Q9UGQ2 172 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 IL36AQ9UHA7 158 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 TMED7Q9Y3B3 224 aa9.35□□□□□ -0.91
MCM3-201ENST00000229854 PCYT1BQ9Y5K3 369 aaPredicted RBP9.35□□□□□ -0.91
MCM3-201ENST00000229854 SPTBP11277 2137 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 FITM1A5D6W6 292 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 MSGN1A6NI15 193 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 C4orf47A7E2U8 309 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 H7C1Q1 480 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 PPIHO43447 177 aaKnown RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 IFNA2P01563 188 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 CRHP06850 196 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ZBTB25P24278 435 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 CCKBRP32239 447 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 RPS27P42677 84 aaKnown RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 NDUFA6P56556 154 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ID2Q02363 134 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 HGFACQ04756 655 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 EEF1A1P5Q5VTE0 462 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 BEND4Q6ZU67 534 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 PAQR4Q8N4S7 273 aaPredicted RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 ZNF565Q8N9K5 539 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ZSCAN4Q8NAM6 433 aaPredicted RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 KREMEN2Q8NCW0 462 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ROBO4Q8WZ75 1007 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 OR52A5Q9H2C5 316 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 DPEP2Q9H4A9 486 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 GFOD1Q9NXC2 390 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 SAGE1Q9NXZ1 904 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 CHRNA9Q9UGM1 479 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 KLHDC2Q9Y2U9 406 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 TBC1D3KA0A087X1G2 549 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 TBC1D3BA6NDS4 549 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 TBC1D3FA6NER0 549 aaPredicted RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 ARGFXA6NJG6 315 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 FGF19O95750 216 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 DBIP07108 87 aaKnown RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 ADH1AP07327 375 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ERCC1P07992 297 aaPredicted RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 CISD3P0C7P0 127 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 RAB6AP20340 208 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ITGA3P26006 1051 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 BCL6P41182 706 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 BTN3A2P78410 334 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 KIAA0141Q14154 515 aaPredicted RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 ELOCQ15369 112 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ARHGAP11BQ3KRB8 267 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 RNASE10Q5GAN6 216 aaKnown RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 TBC1D3GQ6DHY5 549 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 DBX2Q6ZNG2 339 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ZNF584Q8IVC4 421 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 ZNF619Q8N2I2 560 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 OR2L2Q8NH16 312 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 SLC39A7Q92504 469 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 RELTQ969Z4 430 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 MS4A6EQ96DS6 147 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 LINC00615Q96LM1 132 aaPredicted RBP9.34□□□□□ -0.91
MCM3-201ENST00000229854 ALG12Q9BV10 488 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 TEX101Q9BY14 249 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 PRDM7Q9NQW5 492 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 SERTAD3Q9UJW9 196 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 WIF1Q9Y5W5 379 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 KPTNQ9Y664 436 aa9.34□□□□□ -0.91
MCM3-201ENST00000229854 LOC100289279A0A1B0GTE1 492 aa9.33□□□□□ -0.92
MCM3-201ENST00000229854 A0A1B0GWA3 101 aa9.33□□□□□ -0.92
MCM3-201ENST00000229854 TVP23AA6NH52 213 aa9.33□□□□□ -0.92
MCM3-201ENST00000229854 DCTN6O00399 190 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms