RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 LMF1Q96S06 567 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR51M1Q9H341 326 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 TCEAL2Q9H3H9 227 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 AKAP7Q9P0M2 348 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 KLHDC2Q9Y2U9 406 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 A0A1B0GUH1 482 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 RHPN2P1A8MT19 583 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 BLOC1S5-TXNDC5H3BN57 136 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 UBBP0CG47 229 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 UBCP0CG48 685 aaKnown RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR8G3PP0DMU2 310 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 CDKN2AP42771 156 aaKnown RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 GPM6BQ13491 265 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 CCINQ13939 588 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 PRAMEF17Q5VTA0 474 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR52W1Q6IF63 320 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 ULK3Q6PHR2 472 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 NPSR1Q6W5P4 371 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 MUC20Q8N307 709 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 CSNK1A1LQ8N752 337 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR10H5Q8NGA6 315 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 SYNPRQ8TBG9 265 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 Q96M85 177 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 TRIM2Q9C040 744 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 EXOSC3Q9NQT5 275 aaKnown RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 HRASLS2Q9NWW9 162 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 GDE1Q9NZC3 331 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR5V1Q9UGF6 321 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 GTF2A1LQ9UNN4 478 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 FARSAQ9Y285 508 aaKnown RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 NPTNQ9Y639 398 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 SEC16AO15027 2179 aa8.52□□□□□ -1.04
HLA-DOA-201ENST00000229829 hCG_1809904A0A1W2PP81 198 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 A0A1W2PQF6 199 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 A0A1W2PR64 198 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 A0A1W2PRV1 198 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 CTDSPLO15194 276 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 CELA2BP08218 269 aaPredicted RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 ADRA2CP18825 462 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF10P21506 573 aaPredicted RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 ITGA3P26006 1051 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 SDHAP31040 664 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 EPHA4P54764 986 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 RAG2P55895 527 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 MAT1AQ00266 395 aaKnown RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 UBXN2BQ14CS0 331 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 PWWP2BQ6NUJ5 590 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 POMGNT2Q8NAT1 580 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 OR2AK2Q8NG84 335 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 BAHD1Q8TBE0 780 aaPredicted RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 MYADMQ96S97 322 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 SPACA6W5XKT8 324 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 A0A0B4J2A0 478 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 TMEM72A0PK05 275 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 CXorf65A6NEN9 183 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 H7C1C5 153 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 DCTN6O00399 190 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 TYRP1P17643 537 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 CDK2P24941 298 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 SSTP61278 116 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 LCN6P62502 163 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 GGTLC2Q14390 218 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 KCNAB1Q14722 419 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 NFATC4Q14934 902 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 LINC01590Q5TEZ4 76 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 LEG1Q6P5S2 330 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 DPPA2Q7Z7J5 298 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 DMRTC2Q8IXT2 367 aaPredicted RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF565Q8N9K5 539 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 ELP5Q8TE02 316 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 THEM6Q8WUY1 208 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF524Q96C55 264 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 WDR92Q96MX6 357 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 CHST6Q9GZX3 395 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 WDR13Q9H1Z4 485 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 NPDC1Q9NQX5 325 aaPredicted RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 SHPKQ9UHJ6 478 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 FBXO4Q9UKT5 387 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 A6NLC8 198 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 C2orf74A8MZ97 194 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 H7C1Q1 480 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 FOXS1O43638 330 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 GATCO43716 136 aaKnown RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 AK1P00568 194 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 VSIG10L2P0DP72 767 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 RBM34P42696 430 aaKnown RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 P2RX1P51575 399 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 AIMP2Q13155 320 aaKnown RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 GFOD2Q3B7J2 385 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 OR10AC1Q8NH08 325 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZDHHC12Q96GR4 267 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 CLCC1Q96S66 551 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 KLHDC3Q9BQ90 382 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 SLC25A32Q9H2D1 315 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 PIGMQ9H3S5 423 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 MKKSQ9NPJ1 570 aaPredicted RBP8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 FOXJ3Q9UPW0 622 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF281Q9Y2X9 895 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 V9GY05 133 aa8.52□□□□□ -1.05
HLA-DOA-201ENST00000229829 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms