RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 PSKH1P11801 424 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 CHRNB4P30926 498 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 GABARAPL2P60520 117 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
SEC61B-201ENST00000223641 SLC16A9Q7RTY1 509 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 SLC22A24Q8N4F4 322 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 ZNF540Q8NDQ6 660 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 C1orf162Q8NEQ5 155 aaPredicted RBP12.32□□□□□ -0.44
SEC61B-201ENST00000223641 OR4F15Q8NGB8 312 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 OR51G2Q8NGK0 314 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 OR52I1Q8NGK6 324 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 OR1K1Q8NGR3 316 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 LILRB4Q8NHJ6 448 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
SEC61B-201ENST00000223641 ASB5Q8WWX0 329 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 FOXN4Q96NZ1 517 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 INTS14Q96SY0 518 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 CNN2Q99439 309 aaKnown RBP12.32□□□□□ -0.44
SEC61B-201ENST00000223641 ZNF649Q9BS31 505 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 WACQ9BTA9 647 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 JAM3Q9BX67 310 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 YIPF3Q9GZM5 350 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 SEC61A2Q9H9S3 476 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 CYB5R1Q9UHQ9 305 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 KCNG2Q9UJ96 466 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 ERRFI1Q9UJM3 462 aaPredicted RBP12.32□□□□□ -0.44
SEC61B-201ENST00000223641 BLOC1S6Q9UL45 172 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 MYRFQ9Y2G1 1151 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 HIVEP3Q5T1R4 2406 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 PCNX1Q96RV3 2341 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 IRGMA1A4Y4 181 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ZNF593O00488 134 aaPredicted RBP12.31□□□□□ -0.44
SEC61B-201ENST00000223641 SELENOFO60613 162 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 TNFAIP8O95379 198 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ADRA2AP08913 450 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 OR8G3PP0DMU2 310 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 PSMB1P20618 241 aaKnown RBP12.31□□□□□ -0.44
SEC61B-201ENST00000223641 AGAP20933 346 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 MSR1P21757 451 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 DCKP27707 260 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 GUCA1AP43080 201 aaPredicted RBP12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ENTPD1P49961 510 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 TGFBR3Q03167 851 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ST3GAL4Q11206 333 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ENDOGQ14249 297 aaKnown RBP12.31□□□□□ -0.44
SEC61B-201ENST00000223641 GABRA6Q16445 453 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 MEP1BQ16820 701 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 FBXL19-AS1Q494R0 122 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 KCTD21Q4G0X4 260 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 SFRP5Q5T4F7 317 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 RNLSQ5VYX0 342 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ANKRD16Q6P6B7 361 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ZNF813Q6ZN06 617 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 SYT9Q86SS6 491 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 CDC20BQ86Y33 519 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 OTOSQ8NHW6 89 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 SGCDQ92629 289 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 BCL2L2Q92843 193 aaPredicted RBP12.31□□□□□ -0.44
SEC61B-201ENST00000223641 MNTQ99583 582 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ZNF696Q9H7X3 374 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 COQ3Q9NZJ6 369 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 ZNF224Q9NZL3 707 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 RALYQ9UKM9 306 aaKnown RBP12.31□□□□□ -0.44
SEC61B-201ENST00000223641 DIMT1Q9UNQ2 313 aaKnown RBP12.31□□□□□ -0.44
SEC61B-201ENST00000223641 PCDHGB1Q9Y5G3 927 aa12.31□□□□□ -0.44
SEC61B-201ENST00000223641 PTGES3LE9PB15 166 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 MRPS14O60783 128 aaKnown RBP12.3□□□□□ -0.44
SEC61B-201ENST00000223641 APOL3O95236 402 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 FADS2O95864 444 aaKnown RBP12.3□□□□□ -0.44
SEC61B-201ENST00000223641 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 CDK1P06493 297 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 HTR1AP08908 422 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 MRPL3P09001 348 aaKnown RBP12.3□□□□□ -0.44
SEC61B-201ENST00000223641 CST2P09228 141 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 OR2T7P0C7T2 308 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 HOXB1P14653 301 aaPredicted RBP12.3□□□□□ -0.44
SEC61B-201ENST00000223641 B4GALT1P15291 398 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 ZNF823P16415 610 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 ALOX5APP20292 161 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 NAA10P41227 235 aaPredicted RBP12.3□□□□□ -0.44
SEC61B-201ENST00000223641 HIST1H3AP68431 136 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 ADAM8P78325 824 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 MVKQ03426 396 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 SGCAQ16586 387 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 SLC25A35Q3KQZ1 300 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 HIST2H3PS2Q5TEC6 136 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 C9orf135Q5VTT2 229 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 OTPQ5XKR4 325 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 STAC2Q6ZMT1 411 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 AHSA2Q719I0 299 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 HIST2H3AQ71DI3 136 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 SHFQ7M4L6 423 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 DPY19L4Q7Z388 723 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 LUZP2Q86TE4 346 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 CXorf67Q86X51 503 aaPredicted RBP12.3□□□□□ -0.44
SEC61B-201ENST00000223641 ERI1Q8IV48 349 aaKnown RBP12.3□□□□□ -0.44
SEC61B-201ENST00000223641 SKA3Q8IX90 412 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 ACBD7Q8N6N7 88 aa12.3□□□□□ -0.44
SEC61B-201ENST00000223641 OR2T27Q8NH04 317 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms