RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PPIAP62937 165 aaKnown RBP8.56□□□□□ -1.04
CCDC113-201ENST00000219299 EBPQ15125 230 aaKnown RBP8.56□□□□□ -1.04
CCDC113-201ENST00000219299 C5orf46Q6UWT4 87 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 SLC35F2Q8IXU6 374 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 ENTHD1Q8IYW4 607 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 BOLLQ8N9W6 283 aaKnown RBP8.56□□□□□ -1.04
CCDC113-201ENST00000219299 PLPP5Q8NEB5 264 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 PFN4Q8NHR9 129 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 SYNPRQ8TBG9 265 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 GIMAP5Q96F15 307 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 BORCS8Q96FH0 119 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 OR14A2Q96R54 314 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 ACER3Q9NUN7 267 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 NYNRINQ9P2P1 1898 aaKnown RBP8.56□□□□□ -1.04
CCDC113-201ENST00000219299 POM121CA8CG34 1229 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 PRICKLE3O43900 615 aaPredicted RBP8.56□□□□□ -1.04
CCDC113-201ENST00000219299 C1QBP02746 253 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 GABRA5P31644 462 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 EMP3P54852 163 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 ZNF91Q05481 1191 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 PPA1Q15181 289 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 OR1C1Q15619 314 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 HMGN3Q15651 99 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 TMEM163Q8TC26 289 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 ZBTB8AQ96BR9 441 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 ZNF587Q96SQ5 575 aaPredicted RBP8.56□□□□□ -1.04
CCDC113-201ENST00000219299 TXNL4BQ9NX01 149 aaKnown RBP8.56□□□□□ -1.04
CCDC113-201ENST00000219299 BABAM2Q9NXR7 383 aa8.56□□□□□ -1.04
CCDC113-201ENST00000219299 ROS1P08922 2347 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 RTTNQ86VV8 2226 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 A0A1B0GV50 99 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 CDHR4A6H8M9 788 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 E9PI62 339 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 DIRAS3O95661 229 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 RAB40ALP0C0E4 278 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ZNF16P17020 682 aaPredicted RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 FCN2Q15485 313 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 NIPAL3Q6P499 406 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 RAB40AQ8WXH6 277 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 SPTSSAQ969W0 71 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 FOXRED1Q96CU9 486 aaPredicted RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 CENPOQ9BU64 300 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 LAT2Q9GZY6 243 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 MED20Q9H944 212 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 CDH20Q9HBT6 801 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 SIRT5Q9NXA8 310 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 KLHL13Q9P2N7 655 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 MN1Q10571 1320 aaPredicted RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 hCG_1807616A0A1W2PRN6 198 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ZNF850A8MQ14 1090 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 M0R082 166 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 GABRPO00591 440 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 PSMB1P20618 241 aaKnown RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ENPP1P22413 925 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 BIDP55957 195 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 CDC20Q12834 499 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 CLVS2Q5SYC1 327 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 OR10K1Q8NGX5 313 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 SLC25A43Q8WUT9 341 aaPredicted RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 SLC35B4Q969S0 331 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 TM4SF19Q96DZ7 209 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 Q96M85 177 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 NMNAT3Q96T66 252 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 LRFN3Q9BTN0 628 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 EMC6Q9BV81 110 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ZNF71Q9NQZ8 489 aaPredicted RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 UBE2J1Q9Y385 318 aaPredicted RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 EIF1BO60739 113 aaKnown RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 IGHV3-9P01782 118 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 PTBP1P26599 531 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 THBS2P35442 1172 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 APOBEC1P41238 236 aaKnown RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 CSRP3P50461 194 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 BTG1P62324 171 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 CRMP1Q14194 572 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 VASNQ6EMK4 673 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 KIRREL2Q6UWL6 708 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 LYPD4Q6UWN0 246 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 BEND4Q6ZU67 534 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 SUMF2Q8NBJ7 301 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 HRASLS5Q96KN8 279 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ENY2Q9NPA8 101 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 C19orf12Q9NSK7 152 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 PLXNA4Q9HCM2 1894 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ICE1Q9Y2F5 2266 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 FAM230AA0A1W2PPH8 454 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 SULT1C4O75897 302 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 CD14P08571 375 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 HLA-DMAP28067 261 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ZNF169Q14929 603 aaPredicted RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 NKPD1Q17RQ9 610 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 TP53I3Q53FA7 332 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ZNF321PQ8N8H1 164 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 GPR148Q8TDV2 347 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 ZNF566Q969W8 418 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 LMF1Q96S06 567 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 MICU1Q9BPX6 476 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 RCE1Q9Y256 329 aa8.55□□□□□ -1.04
CCDC113-201ENST00000219299 NOSIPQ9Y314 301 aaKnown RBP8.55□□□□□ -1.04
CCDC113-201ENST00000219299 PCDHGA1Q9Y5H4 931 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms