RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TLX3O43711 291 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 RAMP1O60894 148 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 SRSF10O75494 262 aaKnown RBP12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 CSF3P09919 207 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ATF1P18846 271 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ELK1P19419 428 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 CD97P48960 835 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ZNF133P52736 654 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 CLRN1P58418 232 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 SCN1BQ07699 218 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ASAH1Q13510 395 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ABHD17BQ5VST6 288 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ZNF676Q8N7Q3 588 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 RNF133Q8WVZ7 376 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 KCNJ15Q99712 375 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 MRI1Q9BV20 369 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ZFP64Q9NPA5 681 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 TIGARQ9NQ88 270 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ANKRD10Q9NXR5 420 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ABI3Q9P2A4 366 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 A0A0J9YW62 118 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 A0A1W2PPK0 400 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 TRABD2BA6NFA1 517 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 ZNF726A6NNF4 738 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 APOA1P02647 267 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 AZGP1P25311 298 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 DCTDP32321 178 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 CD96P40200 585 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 CASRP41180 1078 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 FOXO1Q12778 655 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 TCF15Q12870 199 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 PYDC2Q56P42 97 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 RHOUQ7L0Q8 258 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 GDPD3Q7L5L3 318 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 GPAT4Q86UL3 456 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 TMPRSS12Q86WS5 348 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 CATSPERDQ86XM0 798 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 DTX1Q86Y01 620 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 IL17RDQ8NFM7 739 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 TRMT10AQ8TBZ6 339 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 C11orf40Q8WZ69 217 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 MCHR2Q969V1 340 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 FER1L6-AS2Q96M78 137 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 SF3B5Q9BWJ5 86 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 SLITRK2Q9H156 845 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 B3GAT2Q9NPZ5 323 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 DEPPQ9NTK1 212 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 LRFN1Q9P244 771 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 IL17BQ9UHF5 180 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 CYB5R1Q9UHQ9 305 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 BOKQ9UMX3 212 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 LRP12Q9Y561 859 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 MRPS18BQ9Y676 258 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 R4GMQ9 66 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 PCNX2A6NKB5 2137 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 A0A087WV48 116 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 A0A1B0GTH9 108 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 A0A1W2PQ09 198 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 LINC01387J3KSC0 135 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 NEURL1O76050 574 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 PNPP00491 289 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 FTH1P19P0C7X4 201 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 SLC2A2P11168 524 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 RBMS1P29558 406 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 TALDO1P37837 337 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 RAC3P60763 192 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 OC90Q02509 493 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 CAMK2DQ13557 499 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 CREB3L2Q70SY1 520 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 DCXRQ7Z4W1 244 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 SAMD12Q8N8I0 201 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 DEFB124Q8NES8 71 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 OR10H5Q8NGA6 315 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 GFI1Q99684 422 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 FAM173AQ9BQD7 235 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 EXTL2Q9UBQ6 330 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 SPATA2Q9UM82 520 aa12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 AK6Q9Y3D8 172 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-201ENST00000023939 SPEGQ15772 3267 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 IFITM5A6NNB3 132 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 CDRT15L2A8MXV6 281 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 FAM25AB3EWG3 89 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 FAM25CB3EWG5 89 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 FAM25GB3EWG6 89 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 AIPO00170 330 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 WNT11O96014 354 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 EIF4EP06730 217 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 KLK2P20151 261 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 CFPP27918 469 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 OTPQ5XKR4 325 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 STAC2Q6ZMT1 411 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 SYT9Q86SS6 491 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 LRRTM1Q86UE6 522 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 OR14L1PQ8NHC6 308 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 ADAMTS14Q8WXS8 1223 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 TMEM54Q969K7 222 aa12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 UTP23Q9BRU9 249 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-201ENST00000023939 TCF7L1Q9HCS4 588 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms