RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Klf5Q9Z0Z7 446 aaKnown RBP14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Dpm1O70152 260 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ntf3P20181 258 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Lingo2Q3URE9 606 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Lrrn1Q61809 716 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 SetmarQ80UJ9 309 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Fbxw13Q8BI57 466 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ndc1Q8VCB1 673 aaKnown RBP14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr51Q8VGG9 307 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r51Q8VIC6 319 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Asb10Q91ZT7 467 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Polr2hQ923G2 150 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gstk1Q9DCM2 226 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Jag2Q9QYE5 1247 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gpc6Q9R087 555 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Lao1B1ARV3 523 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 CrnnD3YUU6 520 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Adam10O35598 749 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Rasd1O35626 280 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Adrb2P18762 418 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Klrb1cP27814 223 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Rps11P62281 158 aaKnown RBP14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Eif4eP63073 217 aaKnown RBP14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Clpsl2Q3UW21 102 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cd47Q61735 303 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr1286Q7TQY2 305 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Pum1Q80U78 1189 aaKnown RBP14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 DgkzQ80UP3 929 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Jazf1Q80ZQ5 243 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Elmod2Q8BGF6 293 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tmem255aQ8BHW5 351 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 BanpQ8VBU8 548 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ccm2lQ8VCC6 481 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hyal3Q8VEI3 412 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr202Q8VGQ3 307 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tmem246Q91YV9 403 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Bhlhe41Q99PV5 410 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Prg4Q9JM99 1054 aa14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ranbp2Q9ERU9 3053 aaKnown RBP14.35□□□□□ -0.11
Trim39-203ENSMUST00000113706 SvilQ8K4L3 2170 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Skint9A7TZG3 319 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Adap1E9PY16 374 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Abcd3P55096 659 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hrh3P58406 445 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hsh2dQ6VYH9 334 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Nectin4Q8R007 508 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tmcc3Q8R310 477 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr54Q8VFE6 313 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr1395Q8VGD7 317 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Jam3Q9D8B7 310 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Zfp712E9PXJ4 705 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn2r89O35199 507 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Csn1s1P19228 313 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cdk5r1P61809 307 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 HpQ61646 347 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Marveld1Q7TQJ1 173 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 MepeQ8K4L6 441 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tceal3Q8R0A5 200 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hsd17b13Q8VCR2 304 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr460Q8VF31 314 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr768Q8VGC4 312 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ddit4lQ8VHZ5 193 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Efcab11Q9D0E5 162 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tor3aQ9ER38 385 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Rad1Q9QWZ1 280 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Pde7bQ9QXQ1 446 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Slc37a2Q9WU81 501 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Oasl2Q9Z2F2 508 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gm364A2AFI6 671 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Lcn11A2BHR2 178 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2abC0HKE1 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2acC0HKE2 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2adC0HKE3 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2aeC0HKE4 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2agC0HKE5 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2aiC0HKE6 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2anC0HKE7 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2aoC0HKE8 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2apC0HKE9 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr608E9Q564 316 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cyp1a2P00186 513 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Nkx2-6P43688 289 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gpr143P70259 405 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Sema3bQ62177 748 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Chst9Q76EC5 413 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist3h2aQ8BFU2 130 aaKnown RBP14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Mettl27Q8BGM4 238 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2afQ8CGP5 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2ahQ8CGP6 128 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Hist1h2akQ8CGP7 130 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Reep4Q8K072 257 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r208Q8R275 308 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r42Q8VBS7 329 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Idh3bQ91VA7 384 aa14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Slc27a4Q91VE0 643 aaKnown RBP14.34□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr1314A2AVL6 312 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 I0C0044D17RikA6PWL3 169 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r137D3YTY1 307 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r143E9PUW9 307 aa14.33□□□□□ -0.12
Trim39-203ENSMUST00000113706 Vmn1r157E9Q069 297 aa14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms