RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Hist1h2aeC0HKE4 130 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist1h2agC0HKE5 130 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist1h2aiC0HKE6 130 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist1h2anC0HKE7 130 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist1h2aoC0HKE8 130 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist1h2apC0HKE9 130 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Susd1E9Q3H4 752 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gm3636E9Q5P1 227 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Olfr190K7N5T5 307 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Vmn1r121K7N6J4 314 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Sema6aO35464 1031 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 P2rx6O54803 389 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Nfatc1O88942 717 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Olfr6P34986 316 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Rps4xP62702 263 aaKnown RBP18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Prrx2Q06348 247 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Wfdc9Q3UW41 83 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 CltbQ6IRU5 229 aaKnown RBP18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Olfr1135Q7TR42 310 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist3h2aQ8BFU2 130 aaKnown RBP18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Rbm4Q8C7Q4 361 aaKnown RBP18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Utp15Q8C7V3 528 aaKnown RBP18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist1h2afQ8CGP5 130 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist1h2ahQ8CGP6 128 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hist1h2akQ8CGP7 130 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Eddm3bQ8K0E4 149 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 H2afjQ8R1M2 129 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 NagsQ8R4H7 527 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Rbm4bQ8VE92 357 aaKnown RBP18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Olfr1079Q8VF52 315 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Zfp959Q91VM8 539 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 OptcQ920A0 328 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 PmpcaQ9DC61 524 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Avpr1bQ9WU02 421 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Sfrp5Q9WU66 314 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Aloxe3Q9WV07 711 aa18.51■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Csmd1Q923L3 3564 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 PvrigA0A1B0GS01 234 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Anxa3O35639 323 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gpr52P0C5J4 361 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Tnfrsf26P83626 204 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Entpd6Q3U0P5 455 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Mrm3Q5ND52 418 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Olfr645Q7TRQ1 315 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 QpctlQ8BH73 383 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 PigzQ8BTP0 560 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gm9999Q8C5Y2 53 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Cdc42ep2Q8JZX9 214 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Zg16Q8K0C5 167 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Slco1a5Q91YY5 670 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Tmem123Q91Z22 195 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Uck2Q99PM9 261 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Tm7sf3Q9CRG1 565 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Utp23Q9CX11 249 aaKnown RBP18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Tmeff2Q9QYM9 374 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Znf346Q9R0B7 294 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Col6a4A2AX52 2309 aa18.5■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gm39566A0A1B0GT45 1251 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gm6890A2BG94 208 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gm438B1ASB3 393 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Vmn2r90E9PXJ8 863 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gm3239L7N2D9 227 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Zmat3O54836 290 aaKnown RBP18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Igh-1aP01865 398 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 MndaP0DOV1 425 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Cpa3P15089 417 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Wt1P22561 449 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Edn3P48299 214 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Abcd3P55096 659 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Ccl21aP84444 133 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Ccl21bP86792 133 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Ccl21cP86793 133 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Nkx3-1P97436 237 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Ankrd33bQ3U0L2 486 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Tbrg1Q3UB74 406 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Sorbs2Q3UTJ2 1180 aaKnown RBP18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 SctrQ5FWI2 447 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Fbxo5Q7TSG3 421 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Hs6st2Q80UW0 612 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Pqlc3Q8C6U2 202 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 A730049H05RikQ8C940 139 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Entpd8Q8K0L2 497 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Znf672Q99LH4 468 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Uqcrfs1Q9CR68 274 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Ptp4a3Q9D658 173 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Sh3bgrlQ9JJU8 114 aaKnown RBP18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 DysfQ9ESD7 2090 aa18.49■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Vmn2r89O35199 507 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gna13P27601 377 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Slc25a33Q3TZX3 320 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Yipf3Q3UDR8 347 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Mccc2Q3ULD5 563 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Thnsl2Q80W22 483 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Gpr171Q8BG55 319 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Q8BTG6 205 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Piwil2Q8CDG1 971 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Thap1Q8CHW1 210 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Angptl8Q8R1L8 198 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Olfr644Q8VH21 314 aa18.48■□□□□ 0.55
Ssbp4-201ENSMUST00000049908 Mrgpra6Q91ZC6 301 aa18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms