RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 C11orf57Q6ZUT1 292 aaPredicted RBP18.35■□□□□ 0.53
LINC02228-204ENST00000642115 EAF2Q96CJ1 260 aaPredicted RBP18.35■□□□□ 0.53
LINC02228-204ENST00000642115 FTOQ9C0B1 505 aaKnown RBP eCLIP18.35■□□□□ 0.53
LINC02228-204ENST00000642115 CHGBP05060 677 aa18.35■□□□□ 0.53
LINC02228-204ENST00000642115 SARM1Q6SZW1 724 aa18.35■□□□□ 0.53
LINC02228-204ENST00000642115 TM6SF1Q9BZW5 370 aa18.35■□□□□ 0.53
LINC02228-204ENST00000642115 BECN2A8MW95 431 aa18.34■□□□□ 0.53
LINC02228-204ENST00000642115 OAS2P29728 719 aaKnown RBP18.34■□□□□ 0.53
LINC02228-204ENST00000642115 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
LINC02228-204ENST00000642115 E4F1Q66K89 784 aaPredicted RBP18.34■□□□□ 0.53
LINC02228-204ENST00000642115 BRF1Q92994 677 aa18.34■□□□□ 0.53
LINC02228-204ENST00000642115 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
LINC02228-204ENST00000642115 ZNF589Q86UQ0 364 aaPredicted RBP18.34■□□□□ 0.53
LINC02228-204ENST00000642115 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
LINC02228-204ENST00000642115 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
LINC02228-204ENST00000642115 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.53
LINC02228-204ENST00000642115 KIF2AO00139 706 aaPredicted RBP18.33■□□□□ 0.53
LINC02228-204ENST00000642115 SASH3O75995 380 aa18.33■□□□□ 0.53
LINC02228-204ENST00000642115 EIF4A1P60842 406 aaKnown RBP18.33■□□□□ 0.53
LINC02228-204ENST00000642115 ICE2Q659A1 982 aa18.33■□□□□ 0.53
LINC02228-204ENST00000642115 ORC3Q9UBD5 711 aaPredicted RBP18.33■□□□□ 0.53
LINC02228-204ENST00000642115 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
LINC02228-204ENST00000642115 MAP4K1Q92918 833 aa18.33■□□□□ 0.52
LINC02228-204ENST00000642115 UBXN6Q9BZV1 441 aa18.33■□□□□ 0.52
LINC02228-204ENST00000642115 GUCY1B3Q02153 619 aa18.33■□□□□ 0.52
LINC02228-204ENST00000642115 UBXN4Q92575 508 aa18.33■□□□□ 0.52
LINC02228-204ENST00000642115 LTKP29376 864 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 TOB2Q14106 344 aaPredicted RBP18.32■□□□□ 0.52
LINC02228-204ENST00000642115 SRLQ86TD4 932 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 PPP1R13BQ96KQ4 1090 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 EPC1Q9H2F5 836 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 ARGLU1Q9NWB6 273 aaPredicted RBP18.32■□□□□ 0.52
LINC02228-204ENST00000642115 KDRP35968 1356 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 DIP2BQ9P265 1576 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 RPS6KB1P23443 525 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 GPS2Q13227 327 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 CCDC129Q6ZRS4 1044 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 REXO1L1PQ8IX06 675 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 KCND1Q9NSA2 647 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 AMOTL2Q9Y2J4 779 aa18.32■□□□□ 0.52
LINC02228-204ENST00000642115 SIRT1Q96EB6 747 aa18.31■□□□□ 0.52
LINC02228-204ENST00000642115 CCDC34Q96HJ3 373 aa18.31■□□□□ 0.52
LINC02228-204ENST00000642115 RRP15Q9Y3B9 282 aaKnown RBP18.31■□□□□ 0.52
LINC02228-204ENST00000642115 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
LINC02228-204ENST00000642115 C3P01024 1663 aa18.31■□□□□ 0.52
LINC02228-204ENST00000642115 SASH1O94885 1247 aa18.3■□□□□ 0.52
LINC02228-204ENST00000642115 TUBGCP6Q96RT7 1819 aa18.3■□□□□ 0.52
LINC02228-204ENST00000642115 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
LINC02228-204ENST00000642115 FBXO18Q8NFZ0 1043 aa18.3■□□□□ 0.52
LINC02228-204ENST00000642115 BICC1Q9H694 974 aaKnown RBP18.3■□□□□ 0.52
LINC02228-204ENST00000642115 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
LINC02228-204ENST00000642115 TBC1D8O95759 1140 aa18.3■□□□□ 0.52
LINC02228-204ENST00000642115 SUCLG2Q96I99 432 aa18.3■□□□□ 0.52
LINC02228-204ENST00000642115 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
LINC02228-204ENST00000642115 ANKRD1Q15327 319 aa18.29■□□□□ 0.52
LINC02228-204ENST00000642115 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
LINC02228-204ENST00000642115 CWC15Q9P013 229 aaKnown RBP18.29■□□□□ 0.52
LINC02228-204ENST00000642115 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
LINC02228-204ENST00000642115 Q6ZUG5 572 aa18.29■□□□□ 0.52
LINC02228-204ENST00000642115 LRRC59Q96AG4 307 aaKnown RBP18.29■□□□□ 0.52
LINC02228-204ENST00000642115 SEC62Q99442 399 aaKnown RBP18.29■□□□□ 0.52
LINC02228-204ENST00000642115 MON2Q7Z3U7 1717 aa18.28■□□□□ 0.52
LINC02228-204ENST00000642115 LMAN1P49257 510 aa18.28■□□□□ 0.52
LINC02228-204ENST00000642115 CCT2P78371 535 aaKnown RBP18.28■□□□□ 0.52
LINC02228-204ENST00000642115 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
LINC02228-204ENST00000642115 ERC1Q8IUD2 1116 aa18.28■□□□□ 0.52
LINC02228-204ENST00000642115 CCAR1Q8IX12 1150 aaKnown RBP18.28■□□□□ 0.52
LINC02228-204ENST00000642115 NRKQ7Z2Y5 1582 aa18.28■□□□□ 0.52
LINC02228-204ENST00000642115 MMP14P50281 582 aa18.28■□□□□ 0.52
LINC02228-204ENST00000642115 GOLGA5Q8TBA6 731 aa18.28■□□□□ 0.52
LINC02228-204ENST00000642115 ADCY9O60503 1353 aa18.27■□□□□ 0.52
LINC02228-204ENST00000642115 CAVIN2O95810 425 aa18.27■□□□□ 0.52
LINC02228-204ENST00000642115 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.52
LINC02228-204ENST00000642115 PSEN1P49768 467 aa18.27■□□□□ 0.52
LINC02228-204ENST00000642115 NBPF6Q5VWK0 638 aa18.27■□□□□ 0.52
LINC02228-204ENST00000642115 NBPF4Q96M43 638 aa18.27■□□□□ 0.52
LINC02228-204ENST00000642115 DNAI1Q9UI46 699 aa18.27■□□□□ 0.52
LINC02228-204ENST00000642115 ITSN1Q15811 1721 aa18.27■□□□□ 0.51
LINC02228-204ENST00000642115 NBPF11Q86T75 865 aa18.27■□□□□ 0.51
LINC02228-204ENST00000642115 HOMER1Q86YM7 354 aa18.27■□□□□ 0.51
LINC02228-204ENST00000642115 DHX40Q8IX18 779 aaKnown RBP18.27■□□□□ 0.51
LINC02228-204ENST00000642115 ADAM21Q9UKJ8 722 aa18.27■□□□□ 0.51
LINC02228-204ENST00000642115 MNS1Q8NEH6 495 aa18.26■□□□□ 0.51
LINC02228-204ENST00000642115 DBF4Q9UBU7 674 aaPredicted RBP18.26■□□□□ 0.51
LINC02228-204ENST00000642115 GUCY2CP25092 1073 aa18.26■□□□□ 0.51
LINC02228-204ENST00000642115 ME1P48163 572 aa18.26■□□□□ 0.51
LINC02228-204ENST00000642115 NEK1Q96PY6 1258 aa18.26■□□□□ 0.51
LINC02228-204ENST00000642115 CARD6Q9BX69 1037 aa18.26■□□□□ 0.51
LINC02228-204ENST00000642115 HIP1O00291 1037 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 MYL6BP14649 208 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 PACS2Q86VP3 889 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 JRKLQ9Y4A0 524 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 USP42Q9H9J4 1324 aaKnown RBP18.25■□□□□ 0.51
LINC02228-204ENST00000642115 TADA3O75528 432 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 CC2D1AQ6P1N0 951 aaPredicted RBP18.25■□□□□ 0.51
LINC02228-204ENST00000642115 CCDC73Q6ZRK6 1079 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 CHST3Q7LGC8 479 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 AOPEPQ8N6M6 819 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 KCNB2Q92953 911 aa18.25■□□□□ 0.51
LINC02228-204ENST00000642115 KINO60870 393 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms