RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 USPL1Q5W0Q7 1092 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 INTS5Q6P9B9 1019 aaKnown RBP21.37■■□□□ 1.01
PHGDH-226ENST00000641756 BLOC1S2Q6QNY1 142 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 HMG20BQ9P0W2 317 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 SMC3Q9UQE7 1217 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 AKAP2Q9Y2D5 859 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 SH3TC1Q8TE82 1336 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 ME3Q16798 604 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 GAS2L3Q86XJ1 694 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 ZSCAN31Q96LW9 406 aaPredicted RBP21.37■■□□□ 1.01
PHGDH-226ENST00000641756 TPCN1Q9ULQ1 816 aa21.37■■□□□ 1.01
PHGDH-226ENST00000641756 CRKLP46109 303 aaKnown RBP21.36■■□□□ 1.01
PHGDH-226ENST00000641756 TTC39AQ5SRH9 613 aa21.36■■□□□ 1.01
PHGDH-226ENST00000641756 WDR33Q9C0J8 1336 aaKnown RBP21.36■■□□□ 1.01
PHGDH-226ENST00000641756 RIC1Q4ADV7 1423 aa21.36■■□□□ 1.01
PHGDH-226ENST00000641756 RPS6KB1P23443 525 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 EIF5P55010 431 aaKnown RBP21.35■■□□□ 1.01
PHGDH-226ENST00000641756 FKBP4Q02790 459 aaKnown RBP eCLIP21.35■■□□□ 1.01
PHGDH-226ENST00000641756 ST3GAL1Q11201 340 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 CCDC158Q5M9N0 1113 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 NECAB1Q8N987 351 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 CCDC87Q9NVE4 849 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 SLIT2O94813 1529 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 LOC102724428A0A0B4J2F2 783 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 ANKRD18BA2A2Z9 1011 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 TOM1O60784 492 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 SIK1P57059 783 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 METTL24Q5JXM2 366 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 LDHAL6AQ6ZMR3 332 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 ZNF34Q8IZ26 560 aa21.35■■□□□ 1.01
PHGDH-226ENST00000641756 SH2B1Q9NRF2 756 aaPredicted RBP21.35■■□□□ 1.01
PHGDH-226ENST00000641756 U3KPZ7 1027 aaPredicted RBP21.35■■□□□ 1.01
PHGDH-226ENST00000641756 FAM177BA6PVY3 158 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 ITPK1Q13572 414 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 TSGA10IPQ3SY00 556 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 CAVIN1Q6NZI2 390 aaKnown RBP21.34■■□□□ 1.01
PHGDH-226ENST00000641756 GPT2Q8TD30 523 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 PANK2Q9BZ23 570 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 HELLSQ9NRZ9 838 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 RIPOR2Q9Y4F9 1068 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 MYH3P11055 1940 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 ZMYM1Q5SVZ6 1142 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 BARGINQ6ZT62 677 aa21.34■■□□□ 1.01
PHGDH-226ENST00000641756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.34■■□□□ 1.01
PHGDH-226ENST00000641756 KCNQ2O43526 872 aa21.33■■□□□ 1.01
PHGDH-226ENST00000641756 PDE8AO60658 829 aa21.33■■□□□ 1.01
PHGDH-226ENST00000641756 GJB2P29033 226 aa21.33■■□□□ 1.01
PHGDH-226ENST00000641756 GRPEL1Q9HAV7 217 aa21.33■■□□□ 1.01
PHGDH-226ENST00000641756 CNNM1Q9NRU3 951 aa21.33■■□□□ 1.01
PHGDH-226ENST00000641756 NWD2Q9ULI1 1742 aa21.33■■□□□ 1
PHGDH-226ENST00000641756 RNF113AO15541 343 aaKnown RBP21.32■■□□□ 1
PHGDH-226ENST00000641756 CYP21A2P08686 494 aa21.32■■□□□ 1
PHGDH-226ENST00000641756 SYT1P21579 422 aa21.32■■□□□ 1
PHGDH-226ENST00000641756 MRE11P49959 708 aa21.32■■□□□ 1
PHGDH-226ENST00000641756 SCARF1Q14162 830 aa21.32■■□□□ 1
PHGDH-226ENST00000641756 STX6O43752 255 aa21.32■■□□□ 1
PHGDH-226ENST00000641756 TOB2Q14106 344 aaPredicted RBP21.32■■□□□ 1
PHGDH-226ENST00000641756 ATP2B3Q16720 1220 aa21.32■■□□□ 1
PHGDH-226ENST00000641756 KRT32Q14532 448 aa21.31■■□□□ 1
PHGDH-226ENST00000641756 FAM98CQ17RN3 349 aaKnown RBP21.31■■□□□ 1
PHGDH-226ENST00000641756 SUSD4Q5VX71 490 aa21.31■■□□□ 1
PHGDH-226ENST00000641756 NEK1Q96PY6 1258 aa21.31■■□□□ 1
PHGDH-226ENST00000641756 RBM27Q9P2N5 1060 aaKnown RBP21.31■■□□□ 1
PHGDH-226ENST00000641756 NSFL1CQ9UNZ2 370 aaKnown RBP21.31■■□□□ 1
PHGDH-226ENST00000641756 MAST3O60307 1309 aa21.31■■□□□ 1
PHGDH-226ENST00000641756 SPEF2Q9C093 1822 aa21.31■■□□□ 1
PHGDH-226ENST00000641756 ZSCAN22P10073 491 aaPredicted RBP21.31■■□□□ 1
PHGDH-226ENST00000641756 PI16Q6UXB8 463 aa21.31■■□□□ 1
PHGDH-226ENST00000641756 GDPD2Q9HCC8 539 aa21.31■■□□□ 1
PHGDH-226ENST00000641756 M0R2C6 588 aa21.3■■□□□ 1
PHGDH-226ENST00000641756 HCLS1P14317 486 aaPredicted RBP21.3■■□□□ 1
PHGDH-226ENST00000641756 ZAP70P43403 619 aa21.29■■□□□ 1
PHGDH-226ENST00000641756 ANKRD1Q15327 319 aa21.29■■□□□ 1
PHGDH-226ENST00000641756 ISY1Q9ULR0 285 aaKnown RBP21.29■■□□□ 1
PHGDH-226ENST00000641756 MYH14Q7Z406 1995 aaKnown RBP21.29■■□□□ 1
PHGDH-226ENST00000641756 C8orf37Q96NL8 207 aa21.29■■□□□ 1
PHGDH-226ENST00000641756 ALDH8A1Q9H2A2 487 aaPredicted RBP21.29■■□□□ 1
PHGDH-226ENST00000641756 CAMTA2O94983 1202 aa21.28■■□□□ 1
PHGDH-226ENST00000641756 STOX1Q6ZVD7 989 aa21.28■■□□□ 1
PHGDH-226ENST00000641756 OSBP2Q969R2 916 aa21.28■■□□□ 1
PHGDH-226ENST00000641756 DSCC1Q9BVC3 393 aa21.28■■□□□ 1
PHGDH-226ENST00000641756 A0A0G2JLW4 131 aa21.28■■□□□ 1
PHGDH-226ENST00000641756 HSPD1P10809 573 aaKnown RBP21.28■■□□□ 1
PHGDH-226ENST00000641756 STK3Q13188 491 aa21.28■■□□□ 1
PHGDH-226ENST00000641756 ZSCAN23Q3MJ62 389 aa21.28■■□□□ 1
PHGDH-226ENST00000641756 VGLL2Q8N8G2 317 aa21.28■■□□□ 1
PHGDH-226ENST00000641756 RTN4Q9NQC3 1192 aaKnown RBP21.27■■□□□ 1
PHGDH-226ENST00000641756 UBAP1LF5GYI3 381 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 F13A1P00488 732 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 Q6ZUG5 572 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 TICAM2Q86XR7 235 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 UTP14AQ9BVJ6 771 aaKnown RBP21.26■□□□□ 0.99
PHGDH-226ENST00000641756 MCAMP43121 646 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 WASHC4Q2M389 1173 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 HELBQ8NG08 1087 aaPredicted RBP21.26■□□□□ 0.99
PHGDH-226ENST00000641756 NGLY1Q96IV0 654 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 LRRC2Q9BYS8 371 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 TCHHQ07283 1943 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 RREB1Q92766 1687 aa21.26■□□□□ 0.99
PHGDH-226ENST00000641756 PDE8BO95263 885 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms