RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 DBNDD2Q9BQY9 259 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 BOLA2Q9H3K6 86 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 ANO2Q9NQ90 1003 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 MSH5O43196 834 aa11.74□□□□□ -0.53
PHGDH-215ENST00000641371 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
PHGDH-215ENST00000641371 SLC5A1P13866 664 aa11.74□□□□□ -0.53
PHGDH-215ENST00000641371 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-215ENST00000641371 TTC39AQ5SRH9 613 aa11.74□□□□□ -0.53
PHGDH-215ENST00000641371 NBPF5PQ86XG9 351 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-215ENST00000641371 KBTBD3Q8NAB2 608 aa11.74□□□□□ -0.53
PHGDH-215ENST00000641371 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-215ENST00000641371 ZBTB22O15209 634 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 IGSF3O75054 1194 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 TRIM37O94972 964 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 FAM182BQ5T319 152 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 RNF20Q5VTR2 975 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 TBC1D9BQ66K14 1250 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 ZSCAN25Q6NSZ9 544 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 POTEAQ6S8J7 498 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 PTF1AQ7RTS3 328 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 XAGE2Q96GT9 111 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
PHGDH-215ENST00000641371 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
PHGDH-215ENST00000641371 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-215ENST00000641371 HSPA4P34932 840 aa11.72□□□□□ -0.53
PHGDH-215ENST00000641371 TXNRD1Q16881 649 aa11.72□□□□□ -0.53
PHGDH-215ENST00000641371 VGLL2Q8N8G2 317 aa11.72□□□□□ -0.53
PHGDH-215ENST00000641371 PUS3Q9BZE2 481 aaKnown RBP11.72□□□□□ -0.53
PHGDH-215ENST00000641371 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.531e-14■□□□□ 11
PHGDH-215ENST00000641371 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
PHGDH-215ENST00000641371 BSDC1Q9NW68 430 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-215ENST00000641371 PAG1Q9NWQ8 432 aa11.72□□□□□ -0.53
PHGDH-215ENST00000641371 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
PHGDH-215ENST00000641371 MED23Q9ULK4 1368 aa11.71□□□□□ -0.53
PHGDH-215ENST00000641371 MYH7P12883 1935 aa11.71□□□□□ -0.53
PHGDH-215ENST00000641371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.71□□□□□ -0.53
PHGDH-215ENST00000641371 K7ELQ4 463 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-215ENST00000641371 NPHP1O15259 732 aa11.71□□□□□ -0.53
PHGDH-215ENST00000641371 MAP4K4O95819 1239 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-215ENST00000641371 ZKSCAN1P17029 563 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-215ENST00000641371 TIMM10P62072 90 aa11.71□□□□□ -0.53
PHGDH-215ENST00000641371 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-215ENST00000641371 CWC27Q6UX04 472 aaKnown RBP11.71□□□□□ -0.53
PHGDH-215ENST00000641371 SYNE4Q8N205 404 aa11.71□□□□□ -0.53
PHGDH-215ENST00000641371 KIF2CQ99661 725 aa11.71□□□□□ -0.53
PHGDH-215ENST00000641371 ANKRD2Q9GZV1 360 aa11.71□□□□□ -0.53
PHGDH-215ENST00000641371 LRRC4BQ9NT99 713 aa11.71□□□□□ -0.53
PHGDH-215ENST00000641371 CASZ1Q86V15 1759 aa11.71□□□□□ -0.54
PHGDH-215ENST00000641371 CCDC171Q6TFL3 1326 aa11.7□□□□□ -0.54
PHGDH-215ENST00000641371 FGFR2P21802 821 aa11.7□□□□□ -0.54
PHGDH-215ENST00000641371 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-215ENST00000641371 ST5P78524 1137 aa11.7□□□□□ -0.54
PHGDH-215ENST00000641371 UBE4AQ14139 1066 aa11.7□□□□□ -0.54
PHGDH-215ENST00000641371 ERFEQ4G0M1 354 aa11.7□□□□□ -0.54
PHGDH-215ENST00000641371 MCMDC2Q4G0Z9 681 aa11.7□□□□□ -0.54
PHGDH-215ENST00000641371 CNBD1Q8NA66 436 aa11.7□□□□□ -0.54
PHGDH-215ENST00000641371 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-215ENST00000641371 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
PHGDH-215ENST00000641371 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
PHGDH-215ENST00000641371 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
PHGDH-215ENST00000641371 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-215ENST00000641371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-215ENST00000641371 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
PHGDH-215ENST00000641371 FAM177BA6PVY3 158 aa11.69□□□□□ -0.54
PHGDH-215ENST00000641371 PSMA5P28066 241 aa11.69□□□□□ -0.54
PHGDH-215ENST00000641371 KRT32Q14532 448 aa11.69□□□□□ -0.54
PHGDH-215ENST00000641371 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
PHGDH-215ENST00000641371 TMC4Q7Z404 712 aa11.69□□□□□ -0.54
PHGDH-215ENST00000641371 KCNB2Q92953 911 aa11.69□□□□□ -0.54
PHGDH-215ENST00000641371 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
PHGDH-215ENST00000641371 SRP68Q9UHB9 627 aaKnown RBP11.69□□□□□ -0.54
PHGDH-215ENST00000641371 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-215ENST00000641371 SEMA3EO15041 775 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 APBA3O96018 575 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 KCNJ4P48050 445 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 KCNQ4P56696 695 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 NMIQ13287 307 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-215ENST00000641371 BICDL1Q6ZP65 573 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 NLGN1Q8N2Q7 840 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 MAP4K1Q92918 833 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 A0A1B0GUL6 1792 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 QSER1Q2KHR3 1735 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
PHGDH-215ENST00000641371 GOLIM4O00461 696 aa11.67□□□□□ -0.54
PHGDH-215ENST00000641371 RNF113AO15541 343 aaKnown RBP11.67□□□□□ -0.54
PHGDH-215ENST00000641371 PHF14O94880 888 aa11.67□□□□□ -0.54
PHGDH-215ENST00000641371 HSP90AA1P07900 732 aaKnown RBP11.67□□□□□ -0.54
PHGDH-215ENST00000641371 GYS1P13807 737 aa11.67□□□□□ -0.54
PHGDH-215ENST00000641371 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
PHGDH-215ENST00000641371 CHRNDQ07001 517 aa11.67□□□□□ -0.54
PHGDH-215ENST00000641371 NFIXQ14938 502 aa11.67□□□□□ -0.54
PHGDH-215ENST00000641371 DSCC1Q9BVC3 393 aa11.67□□□□□ -0.54
PHGDH-215ENST00000641371 PDS5AQ29RF7 1337 aaKnown RBP11.66□□□□□ -0.54
PHGDH-215ENST00000641371 TM4SF1P30408 202 aa11.66□□□□□ -0.54
PHGDH-215ENST00000641371 TSGA10IPQ3SY00 556 aa11.66□□□□□ -0.54
PHGDH-215ENST00000641371 CAVIN4Q5BKX8 364 aa11.66□□□□□ -0.54
PHGDH-215ENST00000641371 ZMYM1Q5SVZ6 1142 aa11.66□□□□□ -0.54
PHGDH-215ENST00000641371 CCDC102BQ68D86 513 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms